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Assay category
3
DNA accessibility
2
Transcription
Assay
3
ATAC-seq
2
single cell RNA-seq
Project
3
HPAP
2
AMP
RFA
3
HPAP
2
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
2
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
5
epithelium
5
pancreas
Life stage
5
adult
Available data
5
bigWig
5
fastq
2
bam
2
tsv
Platform
3
Illumina NextSeq 500
2
Illumina HiSeq 2000
Run type
3
paired-ended
2
single-ended
Read length (nt)
36
101
16
50
11
36
6
75
5
100
4
102
3
41
3
76
2
43
2
44
Library insert size (nt)
2
>100
Library made from
3
DNA
2
RNA
Date released
2
August, 2020
2
July, 2018
1
September, 2020
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
Showing 5 of 5 results
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Experiment
DSR548POI
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (31 year)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR688HHY
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR926SDH
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male adult (47 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR432421
released
single cell RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR018536
released
single cell RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (48 years) and male adult (22 years) and male adult (23 years) and male adult (25 years) and male adult (27 years) and male adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP