Showing 4 of 4 results

• Pipeline

  DPL961ZQY

  active

  ATAC-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953

  Assays: ATAC-seq

  Software: Trim Galore, BWA, Samtools, Picard, MACS2

• Pipeline

  DPL930NXT

  active

  DNase-seq Pipeline (ENCODE)

  Assays: DNase-seq

  Software: hotspot2, BEDOPS, BWA, cutadapt, Samtools, Picard, Digital genomic footprinting, bedToBigBed

• Pipeline

  DPL121OYY

  active

  ATAC-seq Pipeline Gaulton Lab

  Assays: ATAC-seq

  Software: BWA, Samtools, Picard, MACS2, BEDTools

• Pipeline

  DPL118KGX

  active

  ChIP-seq Pipeline Ellinor Lab

  Assays: ChIP-seq

  Software: BWA, Picard, MACS2, BEDTools, ChromHMM