Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Assay
1
RNA-seq
Pipeline status
1
active
Pipeline groups
1
RNA-seq Pipeline Cebola Lab
Software
5
MACS2
5
Samtools
4
BEDTools
3
BWA
3
Picard
3
deepTools
3
fastp
2
Bowtie 2
2
STAR
bedGraphToBigWig
1
ChromHMM
1
RSEM
1
SALMON
1
Trim Galore
0
lrna-index-rsem
Developed by
AMP-T2D consortium
1
Ines Cebola, Imperial College London
lab.title!
AMP-T2D consortium
title!
ATAC-seq Pipeline Cebola Lab
analysis_steps.versions.software_versions.software.title!
bedGraphToBigWig
Showing 1 of 1 results
table-tab-icon
matrix-icon
Pipeline
DPL450NWL
active
RNA-seq Pipeline Cebola Lab
Assays:
RNA-seq
Software:
fastp, STAR, SALMON, Samtools, deepTools