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TF ChIP-seq Pipeline 2 (ENCODE replicated)
TF ChIP-seq Pipeline 2 (ENCODE unreplicated)
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lrna-align-tophat-pe
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TF ChIP-seq Pipeline 2 (ENCODE unreplicated)
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Pipeline
DPL935TZE
active
TF ChIP-seq Pipeline 2 (ENCODE replicated)
Assays:
ChIP-seq, Mint-ChIP-seq
Software:
Bowtie 2, Samtools, sambamba, Picard, cutadapt, ptools_bin, MACS2, BEDTools, Irreproducible Discovery Rate (IDR), Phantompeakqualtools, bedToBigBed