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Assay
  • 4ATAC-seq
  • 2ChIP-seq
  • 2RNA-seq
  • 1single cell isolation followed by RNA-seq
Pipeline status
  • 2active
Pipeline groups
  • 1RNA-seq Pipeline Cebola Lab
  • 1RNA-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953
Software
  • 2STAR
  • 1RSEM
  • 1SALMON
  • 1Samtools
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  • 1fastp
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  • AMP-T2D consortium
  • 1Ines Cebola, Imperial College London
  • 1Kyle Gaulton, UCSD
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  • AMP-T2D consortium

Showing 2 of 2 results

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  • Pipeline

    DPL172PKH

    active

    RNA-seq Pipeline PLoS Genet. 2021-05-13;17(5):e100953
    Assays: RNA-seq
    Software: STAR, RSEM

  • Pipeline

    DPL450NWL

    active

    RNA-seq Pipeline Cebola Lab
    Assays: RNA-seq
    Software: fastp, STAR, SALMON, Samtools, deepTools
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