Summary for annotation file set DSR646GMS
- Status: released
Summary
- Accession
- DSR646GMS
- Description
- Variant allelic effects annotation for MPRA of the cis-regulatory effects of SNPs associated with T2D and altered in vivo islet chromatin accessibility in MIN6 cells under steady state (baseline, DMSO)
- Biosample summary
- MIN6 (Homo sapiens)
- Biosample type
- cell line
- Organism
- human
- Annotation type
- variant allelic effects
- Pipeline used
- DPL126DIZ
- Software used
- mpraflowv.unknown
Attribution
AMP Consortium
- Lab
- AMP-T2D consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Aliases
- amp-t2d-consortium:KhetanNatureCommu2021_MPRA_MIN6_betaCell_DMSO_variantAllelicEffectsAnno
- External resources
- https://zenodo.org/record/4974390#.YzHqHi-B39A
- Collection Tags
- CMDGA