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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
837
candidate regulatory elements
790
accessible chromatin
720
binding sites
395
gene expression
344
target gene predictions
233
eQTL
106
chromatin state
80
variant allelic effects
5
hQTL
4
sQTL
3
meQTL
3
other
3
pQTL
1
caQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
389
May, 2021
333
November, 2021
289
June, 2020
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
89
January, 2020
64
February, 2020
56
January, 2021
49
May, 2022
35
August, 2017
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
June, 2021
1
July, 2020
Available data
3928
bed bed3+
471
bigWig
463
tsv
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
7
bed broadPeak
6
bed narrowPeak
1
bam
1
bed bed6
1
bigBed narrowPeak
Organism
4449
Homo sapiens
Biosample type
1561
cell line
1452
primary cell
1168
tissue
311
in vitro differentiated cells
3
stem cell
Organ
498
epithelium
282
kidney
278
connective tissue
275
brain
162
pancreas
151
musculature of body
138
heart
126
vasculature
115
intestine
105
limb
98
blood vessel
96
lung
95
bodily fluid
95
skin of body
90
blood
82
embryo
76
liver
70
large intestine
62
adipose tissue
46
bone element
46
extraembryonic component
46
stomach
45
artery
41
mammary gland
37
prostate gland
36
lymph node
33
eye
32
penis
29
adrenal gland
27
small intestine
25
ureter
24
placenta
23
gonad
20
esophagus
18
spinal cord
17
uterus
16
nerve
16
thymus
15
spleen
15
vein
12
pituitary gland
12
testis
10
bone marrow
10
lymphatic vessel
10
ovary
9
bronchus
9
skeleton
9
thyroid gland
7
lymphoid tissue
6
breast
6
mouth
5
trachea
3
tongue
3
urinary bladder
3
vagina
1
nose
1
pericardium
Project
4082
AMP
334
ENCODE
56
T1D
19
LungMap
5
community
Genome assembly (visualization)
3978
hg19
809
GRCh38
1
hg18
BIOSAMPLE
TYPE
4496 results
search-icon
table-tab-icon
histone modifications
candidate regulatory elements
accessible chromatin
binding sites
gene expression
target gene predictions
eQTL
chromatin state
variant allelic effects
hQTL
sQTL
meQTL
other
pQTL
caQTL
representative DNase hypersensitivity sites
cell line
EndoC_BH1
1
8
1
8
1
1
breast cancer cell
11
9
H1-hESC
1
1
1
8
1
lymphoblastoid cell line
3
1
2
6
neuroblastoma cell
8
4
+ See 735 more…
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
4
3
5
1
endothelial cell
1
14
2
8
7
macrophage
12
2
3
7
fibroblast
16
4
2
+ See 362 more…
tissue
kidney
2
15
9
1
7
1
2
1
islet of Langerhans
1
5
2
11
1
11
3
1
1
heart
1
18
4
1
2
1
2
2
stomach
1
21
3
2
1
brain
3
13
2
1
1
2
2
1
+ See 227 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
7
1
adipocyte
1
2
2
1
1
4
4
embryonic stem cell
1
5
1
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 104 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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