Summary for embeddings file set DSR132DPW
- Status: released
Summary
- Accession
- DSR132DPW
- Description
- Single-cell ATAC-Seq data from human atherosclerosis. The files contain cells from endarterectomy samples from three donors, yielding approximately 7000 cells total. snATAC-Seq libraries were generated using the 10x Genomics scATAC-Seq v1 kit.
- Biosample summary
- carotid canal
- Biosample type
- tissue
- Organism
- human
- Type
- Accessible chromatin
- Underlying Assay
- 10X snATAC-seq
- Category
- umap
- Pipeline
- /pipelines/DPL126DIZ/
- Software used
- cellranger-atacv1.1
Attribution
AMP Consortium
- Lab
- AMP-T2D consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Aliases
- amp-t2d-consortium:tiitord2021_snATAC_embedding
- External resources
- https://doi.org/10.6084/m9.figshare.14501985
- Collection Tags
- None submitted