Experiment summary for TSTSR028950
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic alpha cell male child (5 years) and male newborn (1 month)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- GEO GSE81547 single cell RNA-seq human pancreatic alpha cell for children
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Size range
- >100
- Strand specificity
- Non-strand-specific
- Platform
- Illumina NextSeq 500
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- Aliases
- amp-t2d-consortium:GSE81547_PancreaticAlpha_child
- Date released
- July 23, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 3 | pancreatic alpha primary cell male newborn (1 month) | TSTBS662759 | TSTLB147708 |
| 1 | 11 | pancreatic alpha primary cell male newborn (1 month) | TSTBS963397 | TSTLB441346 |
| 1 | 25 | pancreatic alpha primary cell male newborn (1 month) | TSTBS425786 | TSTLB922330 |
| 1 | 31 | pancreatic alpha primary cell male newborn (1 month) | TSTBS475405 | TSTLB556169 |
| 1 | 33 | pancreatic alpha primary cell male newborn (1 month) | TSTBS086697 | TSTLB627129 |
| 2 | 3 | pancreatic alpha primary cell male child (5 years) | TSTBS253716 | TSTLB027920 |
| 2 | 10 | pancreatic alpha primary cell male child (5 years) | TSTBS904224 | TSTLB769277 |
| 2 | 24 | pancreatic alpha primary cell male child (5 years) | TSTBS017614 | TSTLB521894 |
| 2 | 27 | pancreatic alpha primary cell male child (5 years) | TSTBS943821 | TSTLB459152 |
| 2 | 34 | pancreatic alpha primary cell male child (5 years) | TSTBS315957 | TSTLB448119 |
| 2 | 40 | pancreatic alpha primary cell male child (5 years) | TSTBS635027 | TSTLB535824 |
| 2 | 44 | pancreatic alpha primary cell male child (5 years) | TSTBS955411 | TSTLB414414 |
| 2 | 50 | pancreatic alpha primary cell male child (5 years) | TSTBS761829 | TSTLB987763 |
| 2 | 58 | pancreatic alpha primary cell male child (5 years) | TSTBS961808 | TSTLB427042 |
| 2 | 60 | pancreatic alpha primary cell male child (5 years) | TSTBS850716 | TSTLB355835 |
| 3 | 2 | pancreatic alpha primary cell male child (5 years) | TSTBS598283 | TSTLB120516 |
| 3 | 4 | pancreatic alpha primary cell male child (5 years) | TSTBS360648 | TSTLB496187 |
| 3 | 8 | pancreatic alpha primary cell male child (5 years) | TSTBS525884 | TSTLB366374 |
| 3 | 12 | pancreatic alpha primary cell male child (5 years) | TSTBS981837 | TSTLB527848 |
| 3 | 19 | pancreatic alpha primary cell male child (5 years) | TSTBS525693 | TSTLB468913 |
| 3 | 28 | pancreatic alpha primary cell male child (5 years) | TSTBS564634 | TSTLB034339 |
| 3 | 32 | pancreatic alpha primary cell male child (5 years) | TSTBS553683 | TSTLB652630 |
| 3 | 35 | pancreatic alpha primary cell male child (5 years) | TSTBS507175 | TSTLB578236 |
| 3 | 37 | pancreatic alpha primary cell male child (5 years) | TSTBS719911 | TSTLB802211 |
| 3 | 41 | pancreatic alpha primary cell male child (5 years) | TSTBS733006 | TSTLB182262 |
| 3 | 45 | pancreatic alpha primary cell male child (5 years) | TSTBS162631 | TSTLB363541 |
| 3 | 50 | pancreatic alpha primary cell male child (5 years) | TSTBS442786 | TSTLB160083 |
| 3 | 55 | pancreatic alpha primary cell male child (5 years) | TSTBS797701 | TSTLB128450 |
| 3 | 60 | pancreatic alpha primary cell male child (5 years) | TSTBS269150 | TSTLB453057 |
| 3 | 64 | pancreatic alpha primary cell male child (5 years) | TSTBS595638 | TSTLB799752 |
| 3 | 68 | pancreatic alpha primary cell male child (5 years) | TSTBS345173 | TSTLB621820 |
| 1 | 4 | pancreatic alpha primary cell male newborn (1 month) | TSTBS939837 | TSTLB378719 |
| 1 | 16 | pancreatic alpha primary cell male newborn (1 month) | TSTBS350748 | TSTLB639429 |
| 1 | 19 | pancreatic alpha primary cell male newborn (1 month) | TSTBS625315 | TSTLB051337 |
| 1 | 22 | pancreatic alpha primary cell male newborn (1 month) | TSTBS551003 | TSTLB289344 |
| 1 | 27 | pancreatic alpha primary cell male newborn (1 month) | TSTBS362466 | TSTLB606088 |
| 1 | 36 | pancreatic alpha primary cell male newborn (1 month) | TSTBS757673 | TSTLB608832 |
| 1 | 38 | pancreatic alpha primary cell male newborn (1 month) | TSTBS341265 | TSTLB598316 |
| 2 | 5 | pancreatic alpha primary cell male child (5 years) | TSTBS593165 | TSTLB712181 |
| 2 | 18 | pancreatic alpha primary cell male child (5 years) | TSTBS862534 | TSTLB832148 |
| 2 | 22 | pancreatic alpha primary cell male child (5 years) | TSTBS176226 | TSTLB524502 |
| 2 | 29 | pancreatic alpha primary cell male child (5 years) | TSTBS442953 | TSTLB984265 |
| 2 | 42 | pancreatic alpha primary cell male child (5 years) | TSTBS028212 | TSTLB408227 |
| 2 | 49 | pancreatic alpha primary cell male child (5 years) | TSTBS210903 | TSTLB346147 |
| 2 | 59 | pancreatic alpha primary cell male child (5 years) | TSTBS133987 | TSTLB416978 |
| 3 | 1 | pancreatic alpha primary cell male child (5 years) | TSTBS230088 | TSTLB130509 |
| 3 | 20 | pancreatic alpha primary cell male child (5 years) | TSTBS624264 | TSTLB728482 |
| 3 | 29 | pancreatic alpha primary cell male child (5 years) | TSTBS826216 | TSTLB670825 |
| 3 | 34 | pancreatic alpha primary cell male child (5 years) | TSTBS707246 | TSTLB360763 |
| 3 | 38 | pancreatic alpha primary cell male child (5 years) | TSTBS886988 | TSTLB083757 |
| 3 | 46 | pancreatic alpha primary cell male child (5 years) | TSTBS132500 | TSTLB590365 |
| 3 | 49 | pancreatic alpha primary cell male child (5 years) | TSTBS141048 | TSTLB582746 |
| 3 | 59 | pancreatic alpha primary cell male child (5 years) | TSTBS572057 | TSTLB012565 |
| 3 | 70 | pancreatic alpha primary cell male child (5 years) | TSTBS566621 | TSTLB058116 |
| 1 | 6 | pancreatic alpha primary cell male newborn (1 month) | TSTBS021596 | TSTLB225631 |
| 1 | 9 | pancreatic alpha primary cell male newborn (1 month) | TSTBS256339 | TSTLB354239 |
| 1 | 14 | pancreatic alpha primary cell male newborn (1 month) | TSTBS515567 | TSTLB209463 |
| 1 | 20 | pancreatic alpha primary cell male newborn (1 month) | TSTBS044659 | TSTLB414633 |
| 1 | 26 | pancreatic alpha primary cell male newborn (1 month) | TSTBS971455 | TSTLB630859 |
| 1 | 30 | pancreatic alpha primary cell male newborn (1 month) | TSTBS197857 | TSTLB520731 |
| 2 | 4 | pancreatic alpha primary cell male child (5 years) | TSTBS160900 | TSTLB673700 |
| 2 | 9 | pancreatic alpha primary cell male child (5 years) | TSTBS343294 | TSTLB639812 |
| 2 | 17 | pancreatic alpha primary cell male child (5 years) | TSTBS414939 | TSTLB314432 |
| 2 | 23 | pancreatic alpha primary cell male child (5 years) | TSTBS300626 | TSTLB583688 |
| 2 | 26 | pancreatic alpha primary cell male child (5 years) | TSTBS072372 | TSTLB716678 |
| 2 | 33 | pancreatic alpha primary cell male child (5 years) | TSTBS571853 | TSTLB942602 |
| 2 | 37 | pancreatic alpha primary cell male child (5 years) | TSTBS151520 | TSTLB671259 |
| 2 | 48 | pancreatic alpha primary cell male child (5 years) | TSTBS206494 | TSTLB213635 |
| 2 | 53 | pancreatic alpha primary cell male child (5 years) | TSTBS104687 | TSTLB473273 |
| 2 | 55 | pancreatic alpha primary cell male child (5 years) | TSTBS774759 | TSTLB438770 |
| 3 | 3 | pancreatic alpha primary cell male child (5 years) | TSTBS738976 | TSTLB306083 |
| 3 | 15 | pancreatic alpha primary cell male child (5 years) | TSTBS345511 | TSTLB313072 |
| 3 | 18 | pancreatic alpha primary cell male child (5 years) | TSTBS295035 | TSTLB833156 |
| 3 | 22 | pancreatic alpha primary cell male child (5 years) | TSTBS068838 | TSTLB712832 |
| 3 | 27 | pancreatic alpha primary cell male child (5 years) | TSTBS295462 | TSTLB483600 |
| 3 | 31 | pancreatic alpha primary cell male child (5 years) | TSTBS214458 | TSTLB859591 |
| 3 | 40 | pancreatic alpha primary cell male child (5 years) | TSTBS358726 | TSTLB847354 |
| 3 | 44 | pancreatic alpha primary cell male child (5 years) | TSTBS226954 | TSTLB571886 |
| 3 | 48 | pancreatic alpha primary cell male child (5 years) | TSTBS866561 | TSTLB908741 |
| 3 | 53 | pancreatic alpha primary cell male child (5 years) | TSTBS066597 | TSTLB801964 |
| 3 | 58 | pancreatic alpha primary cell male child (5 years) | TSTBS487728 | TSTLB645749 |
| 3 | 66 | pancreatic alpha primary cell male child (5 years) | TSTBS773947 | TSTLB158916 |
| 1 | 2 | pancreatic alpha primary cell male newborn (1 month) | TSTBS244644 | TSTLB978544 |
| 1 | 13 | pancreatic alpha primary cell male newborn (1 month) | TSTBS752998 | TSTLB356164 |
| 1 | 15 | pancreatic alpha primary cell male newborn (1 month) | TSTBS459687 | TSTLB181597 |
| 1 | 18 | pancreatic alpha primary cell male newborn (1 month) | TSTBS053572 | TSTLB038505 |
| 1 | 21 | pancreatic alpha primary cell male newborn (1 month) | TSTBS044824 | TSTLB158075 |
| 1 | 23 | pancreatic alpha primary cell male newborn (1 month) | TSTBS288050 | TSTLB454028 |
| 1 | 29 | pancreatic alpha primary cell male newborn (1 month) | TSTBS925039 | TSTLB757269 |
| 2 | 2 | pancreatic alpha primary cell male child (5 years) | TSTBS720297 | TSTLB150807 |
| 2 | 8 | pancreatic alpha primary cell male child (5 years) | TSTBS988714 | TSTLB282384 |
| 2 | 11 | pancreatic alpha primary cell male child (5 years) | TSTBS740076 | TSTLB669214 |
| 2 | 19 | pancreatic alpha primary cell male child (5 years) | TSTBS547882 | TSTLB649573 |
| 2 | 21 | pancreatic alpha primary cell male child (5 years) | TSTBS322584 | TSTLB335992 |
| 2 | 31 | pancreatic alpha primary cell male child (5 years) | TSTBS466747 | TSTLB433650 |
| 2 | 36 | pancreatic alpha primary cell male child (5 years) | TSTBS738184 | TSTLB941923 |
| 2 | 46 | pancreatic alpha primary cell male child (5 years) | TSTBS470802 | TSTLB938482 |
| 2 | 52 | pancreatic alpha primary cell male child (5 years) | TSTBS802920 | TSTLB819112 |
| 2 | 56 | pancreatic alpha primary cell male child (5 years) | TSTBS759093 | TSTLB247892 |
| 3 | 9 | pancreatic alpha primary cell male child (5 years) | TSTBS917836 | TSTLB729339 |
| 3 | 11 | pancreatic alpha primary cell male child (5 years) | TSTBS100373 | TSTLB870315 |
| 3 | 13 | pancreatic alpha primary cell male child (5 years) | TSTBS361104 | TSTLB056614 |
| 3 | 17 | pancreatic alpha primary cell male child (5 years) | TSTBS138917 | TSTLB650979 |
| 3 | 23 | pancreatic alpha primary cell male child (5 years) | TSTBS825241 | TSTLB200076 |
| 3 | 26 | pancreatic alpha primary cell male child (5 years) | TSTBS516617 | TSTLB488126 |
| 3 | 39 | pancreatic alpha primary cell male child (5 years) | TSTBS854337 | TSTLB241213 |
| 3 | 42 | pancreatic alpha primary cell male child (5 years) | TSTBS197602 | TSTLB534197 |
| 3 | 52 | pancreatic alpha primary cell male child (5 years) | TSTBS498532 | TSTLB182160 |
| 3 | 56 | pancreatic alpha primary cell male child (5 years) | TSTBS710763 | TSTLB917643 |
| 3 | 62 | pancreatic alpha primary cell male child (5 years) | TSTBS956688 | TSTLB244424 |
| 3 | 65 | pancreatic alpha primary cell male child (5 years) | TSTBS579371 | TSTLB946888 |
| 3 | 67 | pancreatic alpha primary cell male child (5 years) | TSTBS656011 | TSTLB891825 |
| 1 | 1 | pancreatic alpha primary cell male newborn (1 month) | TSTBS263250 | TSTLB737498 |
| 1 | 5 | pancreatic alpha primary cell male newborn (1 month) | TSTBS632613 | TSTLB605723 |
| 1 | 8 | pancreatic alpha primary cell male newborn (1 month) | TSTBS091597 | TSTLB112485 |
| 1 | 12 | pancreatic alpha primary cell male newborn (1 month) | TSTBS006713 | TSTLB567112 |
| 1 | 24 | pancreatic alpha primary cell male newborn (1 month) | TSTBS655075 | TSTLB929594 |
| 1 | 34 | pancreatic alpha primary cell male newborn (1 month) | TSTBS090089 | TSTLB052480 |
| 2 | 1 | pancreatic alpha primary cell male child (5 years) | TSTBS379005 | TSTLB974586 |
| 2 | 7 | pancreatic alpha primary cell male child (5 years) | TSTBS499320 | TSTLB687947 |
| 2 | 12 | pancreatic alpha primary cell male child (5 years) | TSTBS470552 | TSTLB826328 |
| 2 | 14 | pancreatic alpha primary cell male child (5 years) | TSTBS710699 | TSTLB346228 |
| 2 | 20 | pancreatic alpha primary cell male child (5 years) | TSTBS919085 | TSTLB832705 |
| 2 | 28 | pancreatic alpha primary cell male child (5 years) | TSTBS980465 | TSTLB324651 |
| 2 | 32 | pancreatic alpha primary cell male child (5 years) | TSTBS721786 | TSTLB685309 |
| 2 | 39 | pancreatic alpha primary cell male child (5 years) | TSTBS428163 | TSTLB921542 |
| 2 | 41 | pancreatic alpha primary cell male child (5 years) | TSTBS391606 | TSTLB522657 |
| 2 | 43 | pancreatic alpha primary cell male child (5 years) | TSTBS139394 | TSTLB642153 |
| 2 | 57 | pancreatic alpha primary cell male child (5 years) | TSTBS046090 | TSTLB989707 |
| 2 | 61 | pancreatic alpha primary cell male child (5 years) | TSTBS051200 | TSTLB869717 |
| 3 | 6 | pancreatic alpha primary cell male child (5 years) | TSTBS418108 | TSTLB858648 |
| 3 | 10 | pancreatic alpha primary cell male child (5 years) | TSTBS147447 | TSTLB458579 |
| 3 | 21 | pancreatic alpha primary cell male child (5 years) | TSTBS431351 | TSTLB802732 |
| 3 | 25 | pancreatic alpha primary cell male child (5 years) | TSTBS758515 | TSTLB510895 |
| 3 | 36 | pancreatic alpha primary cell male child (5 years) | TSTBS970489 | TSTLB767394 |
| 3 | 43 | pancreatic alpha primary cell male child (5 years) | TSTBS641332 | TSTLB238228 |
| 3 | 47 | pancreatic alpha primary cell male child (5 years) | TSTBS871563 | TSTLB819372 |
| 3 | 57 | pancreatic alpha primary cell male child (5 years) | TSTBS009236 | TSTLB164868 |
| 3 | 63 | pancreatic alpha primary cell male child (5 years) | TSTBS658511 | TSTLB308247 |
| 3 | 71 | pancreatic alpha primary cell male child (5 years) | TSTBS065357 | TSTLB580327 |
| 1 | 7 | pancreatic alpha primary cell male newborn (1 month) | TSTBS126586 | TSTLB898533 |
| 1 | 10 | pancreatic alpha primary cell male newborn (1 month) | TSTBS864761 | TSTLB173130 |
| 1 | 17 | pancreatic alpha primary cell male newborn (1 month) | TSTBS460635 | TSTLB130240 |
| 1 | 28 | pancreatic alpha primary cell male newborn (1 month) | TSTBS629854 | TSTLB612867 |
| 1 | 32 | pancreatic alpha primary cell male newborn (1 month) | TSTBS075055 | TSTLB632220 |
| 1 | 35 | pancreatic alpha primary cell male newborn (1 month) | TSTBS366499 | TSTLB292019 |
| 1 | 37 | pancreatic alpha primary cell male newborn (1 month) | TSTBS925735 | TSTLB159181 |
| 2 | 6 | pancreatic alpha primary cell male child (5 years) | TSTBS394479 | TSTLB851785 |
| 2 | 13 | pancreatic alpha primary cell male child (5 years) | TSTBS267241 | TSTLB817451 |
| 2 | 15 | pancreatic alpha primary cell male child (5 years) | TSTBS716302 | TSTLB254850 |
| 2 | 16 | pancreatic alpha primary cell male child (5 years) | TSTBS464930 | TSTLB963970 |
| 2 | 25 | pancreatic alpha primary cell male child (5 years) | TSTBS950633 | TSTLB304583 |
| 2 | 30 | pancreatic alpha primary cell male child (5 years) | TSTBS224868 | TSTLB578020 |
| 2 | 35 | pancreatic alpha primary cell male child (5 years) | TSTBS297644 | TSTLB638234 |
| 2 | 38 | pancreatic alpha primary cell male child (5 years) | TSTBS941066 | TSTLB760501 |
| 2 | 45 | pancreatic alpha primary cell male child (5 years) | TSTBS137864 | TSTLB142813 |
| 2 | 47 | pancreatic alpha primary cell male child (5 years) | TSTBS079932 | TSTLB893962 |
| 2 | 51 | pancreatic alpha primary cell male child (5 years) | TSTBS478262 | TSTLB345340 |
| 2 | 54 | pancreatic alpha primary cell male child (5 years) | TSTBS724553 | TSTLB677700 |
| 3 | 5 | pancreatic alpha primary cell male child (5 years) | TSTBS290889 | TSTLB202558 |
| 3 | 7 | pancreatic alpha primary cell male child (5 years) | TSTBS929304 | TSTLB529792 |
| 3 | 14 | pancreatic alpha primary cell male child (5 years) | TSTBS056531 | TSTLB823069 |
| 3 | 16 | pancreatic alpha primary cell male child (5 years) | TSTBS903663 | TSTLB704690 |
| 3 | 24 | pancreatic alpha primary cell male child (5 years) | TSTBS886031 | TSTLB947179 |
| 3 | 30 | pancreatic alpha primary cell male child (5 years) | TSTBS132568 | TSTLB576734 |
| 3 | 33 | pancreatic alpha primary cell male child (5 years) | TSTBS777562 | TSTLB190372 |
| 3 | 51 | pancreatic alpha primary cell male child (5 years) | TSTBS071865 | TSTLB549592 |
| 3 | 54 | pancreatic alpha primary cell male child (5 years) | TSTBS380396 | TSTLB863706 |
| 3 | 61 | pancreatic alpha primary cell male child (5 years) | TSTBS954886 | TSTLB697620 |
| 3 | 69 | pancreatic alpha primary cell male child (5 years) | TSTBS607641 | TSTLB140535 |