Experiment summary for TSTSR257832
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic alpha cell female adult (42 years) and female adult (55 years) and male adult (51 year)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- GEO GSE86473 single cell RNA-seq of human pancreatic pancreatic alpha cell for T2D individual
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Size range
- >200
- Strand specificity
- Non-strand-specific
- Platform
- Illumina NextSeq 500
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- Aliases
- amp-t2d-consortium:GSE86473_scRNA_Alpha_T2D
- Date released
- July 24, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 7 | pancreatic alpha primary cell male adult (51 year) | TSTBS939509 | TSTLB113175 |
| 1 | 9 | pancreatic alpha primary cell male adult (51 year) | TSTBS437927 | TSTLB933717 |
| 1 | 16 | pancreatic alpha primary cell male adult (51 year) | TSTBS076138 | TSTLB106730 |
| 1 | 20 | pancreatic alpha primary cell male adult (51 year) | TSTBS607057 | TSTLB155408 |
| 1 | 2 | pancreatic alpha primary cell male adult (51 year) | TSTBS987400 | TSTLB288550 |
| 1 | 10 | pancreatic alpha primary cell male adult (51 year) | TSTBS411776 | TSTLB152802 |
| 1 | 30 | pancreatic alpha primary cell male adult (51 year) | TSTBS137172 | TSTLB995330 |
| 1 | 32 | pancreatic alpha primary cell male adult (51 year) | TSTBS587619 | TSTLB505369 |
| 2 | 3 | pancreatic alpha primary cell female adult (55 years) | TSTBS590634 | TSTLB238956 |
| 1 | 3 | pancreatic alpha primary cell male adult (51 year) | TSTBS981224 | TSTLB396300 |
| 1 | 11 | pancreatic alpha primary cell male adult (51 year) | TSTBS351888 | TSTLB114228 |
| 1 | 28 | pancreatic alpha primary cell male adult (51 year) | TSTBS367053 | TSTLB324016 |
| 1 | 34 | pancreatic alpha primary cell male adult (51 year) | TSTBS008641 | TSTLB392092 |
| 2 | 6 | pancreatic alpha primary cell female adult (55 years) | TSTBS595645 | TSTLB679755 |
| 2 | 16 | pancreatic alpha primary cell female adult (55 years) | TSTBS553663 | TSTLB364243 |
| 2 | 22 | pancreatic alpha primary cell female adult (55 years) | TSTBS732538 | TSTLB045957 |
| 3 | 3 | pancreatic alpha primary cell female adult (42 years) | TSTBS160397 | TSTLB282215 |
| 3 | 5 | pancreatic alpha primary cell female adult (42 years) | TSTBS157965 | TSTLB593663 |
| 3 | 14 | pancreatic alpha primary cell female adult (42 years) | TSTBS901214 | TSTLB302112 |
| 3 | 16 | pancreatic alpha primary cell female adult (42 years) | TSTBS039495 | TSTLB520974 |
| 3 | 24 | pancreatic alpha primary cell female adult (42 years) | TSTBS210933 | TSTLB837266 |
| 3 | 33 | pancreatic alpha primary cell female adult (42 years) | TSTBS619942 | TSTLB328168 |
| 3 | 40 | pancreatic alpha primary cell female adult (42 years) | TSTBS428134 | TSTLB118298 |
| 1 | 5 | pancreatic alpha primary cell male adult (51 year) | TSTBS700606 | TSTLB476272 |
| 1 | 12 | pancreatic alpha primary cell male adult (51 year) | TSTBS876610 | TSTLB888961 |
| 1 | 14 | pancreatic alpha primary cell male adult (51 year) | TSTBS712241 | TSTLB885691 |
| 1 | 18 | pancreatic alpha primary cell male adult (51 year) | TSTBS305164 | TSTLB900769 |
| 1 | 22 | pancreatic alpha primary cell male adult (51 year) | TSTBS928824 | TSTLB363012 |
| 1 | 26 | pancreatic alpha primary cell male adult (51 year) | TSTBS728734 | TSTLB242816 |
| 1 | 35 | pancreatic alpha primary cell male adult (51 year) | TSTBS808115 | TSTLB629473 |
| 2 | 5 | pancreatic alpha primary cell female adult (55 years) | TSTBS319470 | TSTLB427124 |
| 2 | 11 | pancreatic alpha primary cell female adult (55 years) | TSTBS391749 | TSTLB401572 |
| 2 | 23 | pancreatic alpha primary cell female adult (55 years) | TSTBS497783 | TSTLB477146 |
| 3 | 4 | pancreatic alpha primary cell female adult (42 years) | TSTBS671809 | TSTLB048822 |
| 3 | 11 | pancreatic alpha primary cell female adult (42 years) | TSTBS916142 | TSTLB049686 |
| 3 | 18 | pancreatic alpha primary cell female adult (42 years) | TSTBS844503 | TSTLB875840 |
| 3 | 20 | pancreatic alpha primary cell female adult (42 years) | TSTBS600212 | TSTLB983954 |
| 3 | 22 | pancreatic alpha primary cell female adult (42 years) | TSTBS121309 | TSTLB528284 |
| 3 | 27 | pancreatic alpha primary cell female adult (42 years) | TSTBS430184 | TSTLB156776 |
| 3 | 29 | pancreatic alpha primary cell female adult (42 years) | TSTBS817460 | TSTLB331341 |
| 3 | 31 | pancreatic alpha primary cell female adult (42 years) | TSTBS708339 | TSTLB093300 |
| 3 | 38 | pancreatic alpha primary cell female adult (42 years) | TSTBS108593 | TSTLB970071 |
| 1 | 1 | pancreatic alpha primary cell male adult (51 year) | TSTBS563975 | TSTLB850524 |
| 1 | 8 | pancreatic alpha primary cell male adult (51 year) | TSTBS896205 | TSTLB812579 |
| 1 | 15 | pancreatic alpha primary cell male adult (51 year) | TSTBS099761 | TSTLB435748 |
| 1 | 17 | pancreatic alpha primary cell male adult (51 year) | TSTBS928197 | TSTLB649500 |
| 1 | 19 | pancreatic alpha primary cell male adult (51 year) | TSTBS213646 | TSTLB462059 |
| 1 | 21 | pancreatic alpha primary cell male adult (51 year) | TSTBS435086 | TSTLB031178 |
| 1 | 23 | pancreatic alpha primary cell male adult (51 year) | TSTBS393838 | TSTLB139162 |
| 1 | 25 | pancreatic alpha primary cell male adult (51 year) | TSTBS809377 | TSTLB605419 |
| 1 | 29 | pancreatic alpha primary cell male adult (51 year) | TSTBS422284 | TSTLB989194 |
| 1 | 33 | pancreatic alpha primary cell male adult (51 year) | TSTBS594698 | TSTLB068138 |
| 2 | 4 | pancreatic alpha primary cell female adult (55 years) | TSTBS998403 | TSTLB702496 |
| 2 | 8 | pancreatic alpha primary cell female adult (55 years) | TSTBS669915 | TSTLB209436 |
| 2 | 14 | pancreatic alpha primary cell female adult (55 years) | TSTBS508445 | TSTLB601753 |
| 2 | 18 | pancreatic alpha primary cell female adult (55 years) | TSTBS595868 | TSTLB609537 |
| 2 | 20 | pancreatic alpha primary cell female adult (55 years) | TSTBS337759 | TSTLB624053 |
| 3 | 1 | pancreatic alpha primary cell female adult (42 years) | TSTBS470140 | TSTLB952112 |
| 3 | 7 | pancreatic alpha primary cell female adult (42 years) | TSTBS221633 | TSTLB108670 |
| 3 | 15 | pancreatic alpha primary cell female adult (42 years) | TSTBS851732 | TSTLB740723 |
| 3 | 23 | pancreatic alpha primary cell female adult (42 years) | TSTBS228233 | TSTLB962821 |
| 3 | 34 | pancreatic alpha primary cell female adult (42 years) | TSTBS103301 | TSTLB098500 |
| 1 | 4 | pancreatic alpha primary cell male adult (51 year) | TSTBS630751 | TSTLB284276 |
| 1 | 6 | pancreatic alpha primary cell male adult (51 year) | TSTBS720268 | TSTLB128891 |
| 1 | 13 | pancreatic alpha primary cell male adult (51 year) | TSTBS169101 | TSTLB554977 |
| 1 | 24 | pancreatic alpha primary cell male adult (51 year) | TSTBS988972 | TSTLB129420 |
| 1 | 27 | pancreatic alpha primary cell male adult (51 year) | TSTBS671147 | TSTLB329491 |
| 1 | 31 | pancreatic alpha primary cell male adult (51 year) | TSTBS549863 | TSTLB603905 |
| 2 | 1 | pancreatic alpha primary cell female adult (55 years) | TSTBS700193 | TSTLB727820 |
| 2 | 9 | pancreatic alpha primary cell female adult (55 years) | TSTBS291179 | TSTLB723973 |
| 2 | 13 | pancreatic alpha primary cell female adult (55 years) | TSTBS696338 | TSTLB938529 |
| 2 | 19 | pancreatic alpha primary cell female adult (55 years) | TSTBS621309 | TSTLB275521 |
| 2 | 25 | pancreatic alpha primary cell female adult (55 years) | TSTBS873919 | TSTLB040501 |
| 3 | 9 | pancreatic alpha primary cell female adult (42 years) | TSTBS928981 | TSTLB810695 |
| 3 | 17 | pancreatic alpha primary cell female adult (42 years) | TSTBS999474 | TSTLB219632 |
| 3 | 25 | pancreatic alpha primary cell female adult (42 years) | TSTBS607771 | TSTLB749452 |
| 3 | 32 | pancreatic alpha primary cell female adult (42 years) | TSTBS485247 | TSTLB561004 |
| 3 | 39 | pancreatic alpha primary cell female adult (42 years) | TSTBS321004 | TSTLB195921 |
| 1 | 36 | pancreatic alpha primary cell male adult (51 year) | TSTBS386964 | TSTLB710776 |
| 2 | 2 | pancreatic alpha primary cell female adult (55 years) | TSTBS254030 | TSTLB712795 |
| 2 | 7 | pancreatic alpha primary cell female adult (55 years) | TSTBS652390 | TSTLB526720 |
| 2 | 15 | pancreatic alpha primary cell female adult (55 years) | TSTBS779265 | TSTLB668179 |
| 2 | 17 | pancreatic alpha primary cell female adult (55 years) | TSTBS172935 | TSTLB166814 |
| 2 | 21 | pancreatic alpha primary cell female adult (55 years) | TSTBS664133 | TSTLB017485 |
| 3 | 2 | pancreatic alpha primary cell female adult (42 years) | TSTBS506251 | TSTLB121368 |
| 3 | 6 | pancreatic alpha primary cell female adult (42 years) | TSTBS104073 | TSTLB794251 |
| 3 | 8 | pancreatic alpha primary cell female adult (42 years) | TSTBS662111 | TSTLB294769 |
| 3 | 10 | pancreatic alpha primary cell female adult (42 years) | TSTBS552651 | TSTLB008099 |
| 3 | 12 | pancreatic alpha primary cell female adult (42 years) | TSTBS362411 | TSTLB879550 |
| 3 | 19 | pancreatic alpha primary cell female adult (42 years) | TSTBS102162 | TSTLB354248 |
| 3 | 26 | pancreatic alpha primary cell female adult (42 years) | TSTBS648532 | TSTLB910177 |
| 3 | 30 | pancreatic alpha primary cell female adult (42 years) | TSTBS193229 | TSTLB449983 |
| 3 | 36 | pancreatic alpha primary cell female adult (42 years) | TSTBS091442 | TSTLB176887 |
| 2 | 10 | pancreatic alpha primary cell female adult (55 years) | TSTBS202966 | TSTLB434317 |
| 2 | 12 | pancreatic alpha primary cell female adult (55 years) | TSTBS565346 | TSTLB767803 |
| 2 | 24 | pancreatic alpha primary cell female adult (55 years) | TSTBS455160 | TSTLB521147 |
| 3 | 13 | pancreatic alpha primary cell female adult (42 years) | TSTBS630799 | TSTLB214801 |
| 3 | 21 | pancreatic alpha primary cell female adult (42 years) | TSTBS750199 | TSTLB422532 |
| 3 | 28 | pancreatic alpha primary cell female adult (42 years) | TSTBS581665 | TSTLB407186 |
| 3 | 35 | pancreatic alpha primary cell female adult (42 years) | TSTBS839267 | TSTLB894874 |
| 3 | 37 | pancreatic alpha primary cell female adult (42 years) | TSTBS375724 | TSTLB584915 |