Experiment summary for TSTSR545287
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic polypeptide-secreting cell female adult (37 years) and female adult (41 year) and female adult (55 years) and male adult (42 years) and male adult (51 year) and male adult (57 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- GEO GSE81608 single cell RNA-seq of human pancreatic polypeptide-secreting cell for type 2 diabetic individual
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Strand specificity
- Non-strand-specific
- Platform
- Illumina HiSeq 2500
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- Aliases
- amp-t2d-consortium:GSE81608_scRNA_humanPancreas_T2D_PPCell
- Date released
- April 23, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 13 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS524198 | TSTLB405610 |
| 1 | 17 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS899381 | TSTLB388096 |
| 1 | 26 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS453475 | TSTLB928683 |
| 1 | 33 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS423887 | TSTLB973002 |
| 1 | 35 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS414522 | TSTLB096440 |
| 2 | 9 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS986759 | TSTLB446421 |
| 3 | 1 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS677904 | TSTLB051251 |
| 5 | 1 | pancreatic polypeptide-secreting primary cell male adult (42 years) | TSTBS496149 | TSTLB803956 |
| 1 | 2 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS015080 | TSTLB439920 |
| 1 | 9 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS749823 | TSTLB903790 |
| 1 | 15 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS835573 | TSTLB710365 |
| 1 | 22 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS918230 | TSTLB255006 |
| 1 | 24 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS136174 | TSTLB540929 |
| 1 | 31 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS791610 | TSTLB385493 |
| 2 | 3 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS586460 | TSTLB060891 |
| 2 | 5 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS243696 | TSTLB225512 |
| 2 | 7 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS944830 | TSTLB963747 |
| 4 | 1 | pancreatic polypeptide-secreting primary cell female adult (41 year) | TSTBS525213 | TSTLB626023 |
| 1 | 5 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS798347 | TSTLB606265 |
| 1 | 8 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS467413 | TSTLB094292 |
| 1 | 11 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS636089 | TSTLB191391 |
| 1 | 19 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS348306 | TSTLB963516 |
| 1 | 27 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS687257 | TSTLB888998 |
| 1 | 36 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS554765 | TSTLB556014 |
| 2 | 10 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS463685 | TSTLB052188 |
| 4 | 2 | pancreatic polypeptide-secreting primary cell female adult (41 year) | TSTBS905349 | TSTLB648181 |
| 5 | 2 | pancreatic polypeptide-secreting primary cell male adult (42 years) | TSTBS170387 | TSTLB830368 |
| 1 | 3 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS699906 | TSTLB359209 |
| 1 | 6 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS107772 | TSTLB686279 |
| 1 | 14 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS214264 | TSTLB095931 |
| 1 | 18 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS517738 | TSTLB991221 |
| 1 | 21 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS933791 | TSTLB610791 |
| 1 | 23 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS749699 | TSTLB941775 |
| 1 | 29 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS558008 | TSTLB613950 |
| 2 | 1 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS107813 | TSTLB170315 |
| 3 | 2 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS059368 | TSTLB922748 |
| 1 | 1 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS114236 | TSTLB788788 |
| 1 | 10 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS714537 | TSTLB278750 |
| 1 | 16 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS274968 | TSTLB579491 |
| 1 | 25 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS797256 | TSTLB972892 |
| 1 | 32 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS871957 | TSTLB524995 |
| 1 | 34 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS983456 | TSTLB748078 |
| 2 | 4 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS581142 | TSTLB310316 |
| 2 | 6 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS859272 | TSTLB380307 |
| 2 | 8 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS602205 | TSTLB011211 |
| 1 | 4 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS694335 | TSTLB882347 |
| 1 | 7 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS545784 | TSTLB373822 |
| 1 | 12 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS343757 | TSTLB975873 |
| 1 | 20 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS061842 | TSTLB652994 |
| 1 | 28 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS203020 | TSTLB661032 |
| 1 | 30 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS622603 | TSTLB109374 |
| 2 | 2 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS098702 | TSTLB206918 |
| 3 | 3 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS466773 | TSTLB167493 |
| 6 | 1 | pancreatic polypeptide-secreting primary cell male adult (51 year) | TSTBS212501 | TSTLB004150 |