Experiment summary for TSTSR570089
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic alpha cell female adult (37 years) and male adult (57 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- GEO GSE83139 single cell RNA-seq of human pancreatic pancreatic alpha cell for T2D individual
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Strand specificity
- Non-strand-specific
- Platform
- Illumina HiSeq 2500
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- References
- Aliases
- amp-t2d-consortium:GSE83139_scRNA_humanPancreas_T2D_alphaCell
- Date released
- July 23, 2018
Anisogenic replicates
Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 7 | pancreatic alpha primary cell male adult (57 years) | TSTBS100552 | TSTLB488508 |
1 | 11 | pancreatic alpha primary cell male adult (57 years) | TSTBS542486 | TSTLB885940 |
1 | 20 | pancreatic alpha primary cell male adult (57 years) | TSTBS876820 | TSTLB402838 |
1 | 23 | pancreatic alpha primary cell male adult (57 years) | TSTBS084322 | TSTLB794445 |
1 | 26 | pancreatic alpha primary cell male adult (57 years) | TSTBS481609 | TSTLB904488 |
1 | 29 | pancreatic alpha primary cell male adult (57 years) | TSTBS535952 | TSTLB599127 |
1 | 37 | pancreatic alpha primary cell male adult (57 years) | TSTBS946546 | TSTLB310553 |
1 | 49 | pancreatic alpha primary cell male adult (57 years) | TSTBS752299 | TSTLB806833 |
1 | 52 | pancreatic alpha primary cell male adult (57 years) | TSTBS033605 | TSTLB867750 |
2 | 2 | pancreatic alpha primary cell female adult (37 years) | TSTBS432208 | TSTLB967339 |
2 | 20 | pancreatic alpha primary cell female adult (37 years) | TSTBS643804 | TSTLB315837 |
2 | 28 | pancreatic alpha primary cell female adult (37 years) | TSTBS016719 | TSTLB206838 |
2 | 37 | pancreatic alpha primary cell female adult (37 years) | TSTBS628618 | TSTLB636274 |
3 | 6 | pancreatic alpha primary cell female adult (37 years) | TSTBS067667 | TSTLB935699 |
1 | 5 | pancreatic alpha primary cell male adult (57 years) | TSTBS686352 | TSTLB057951 |
1 | 14 | pancreatic alpha primary cell male adult (57 years) | TSTBS399024 | TSTLB692112 |
1 | 19 | pancreatic alpha primary cell male adult (57 years) | TSTBS322104 | TSTLB196488 |
1 | 24 | pancreatic alpha primary cell male adult (57 years) | TSTBS948698 | TSTLB463002 |
1 | 33 | pancreatic alpha primary cell male adult (57 years) | TSTBS644323 | TSTLB088893 |
1 | 44 | pancreatic alpha primary cell male adult (57 years) | TSTBS754988 | TSTLB084371 |
1 | 46 | pancreatic alpha primary cell male adult (57 years) | TSTBS651624 | TSTLB341667 |
1 | 48 | pancreatic alpha primary cell male adult (57 years) | TSTBS918687 | TSTLB361066 |
2 | 6 | pancreatic alpha primary cell female adult (37 years) | TSTBS484015 | TSTLB389144 |
1 | 2 | pancreatic alpha primary cell male adult (57 years) | TSTBS754339 | TSTLB830139 |
1 | 6 | pancreatic alpha primary cell male adult (57 years) | TSTBS141061 | TSTLB831057 |
1 | 15 | pancreatic alpha primary cell male adult (57 years) | TSTBS976308 | TSTLB133841 |
1 | 18 | pancreatic alpha primary cell male adult (57 years) | TSTBS803295 | TSTLB024651 |
1 | 22 | pancreatic alpha primary cell male adult (57 years) | TSTBS055391 | TSTLB283047 |
1 | 25 | pancreatic alpha primary cell male adult (57 years) | TSTBS934378 | TSTLB681310 |
1 | 32 | pancreatic alpha primary cell male adult (57 years) | TSTBS336225 | TSTLB274424 |
1 | 35 | pancreatic alpha primary cell male adult (57 years) | TSTBS571043 | TSTLB198134 |
1 | 41 | pancreatic alpha primary cell male adult (57 years) | TSTBS863871 | TSTLB711948 |
1 | 43 | pancreatic alpha primary cell male adult (57 years) | TSTBS529365 | TSTLB282577 |
1 | 50 | pancreatic alpha primary cell male adult (57 years) | TSTBS266679 | TSTLB027277 |
2 | 4 | pancreatic alpha primary cell female adult (37 years) | TSTBS456524 | TSTLB418167 |
2 | 13 | pancreatic alpha primary cell female adult (37 years) | TSTBS430331 | TSTLB058847 |
2 | 16 | pancreatic alpha primary cell female adult (37 years) | TSTBS407071 | TSTLB572924 |
1 | 4 | pancreatic alpha primary cell male adult (57 years) | TSTBS369052 | TSTLB420629 |
1 | 10 | pancreatic alpha primary cell male adult (57 years) | TSTBS929647 | TSTLB793098 |
1 | 16 | pancreatic alpha primary cell male adult (57 years) | TSTBS980918 | TSTLB189688 |
1 | 36 | pancreatic alpha primary cell male adult (57 years) | TSTBS665977 | TSTLB981742 |
1 | 40 | pancreatic alpha primary cell male adult (57 years) | TSTBS758451 | TSTLB478451 |
1 | 42 | pancreatic alpha primary cell male adult (57 years) | TSTBS560097 | TSTLB214575 |
1 | 51 | pancreatic alpha primary cell male adult (57 years) | TSTBS821334 | TSTLB036343 |
2 | 7 | pancreatic alpha primary cell female adult (37 years) | TSTBS491071 | TSTLB392577 |
2 | 18 | pancreatic alpha primary cell female adult (37 years) | TSTBS168347 | TSTLB623767 |
2 | 21 | pancreatic alpha primary cell female adult (37 years) | TSTBS764254 | TSTLB093996 |
2 | 23 | pancreatic alpha primary cell female adult (37 years) | TSTBS900940 | TSTLB953293 |
2 | 29 | pancreatic alpha primary cell female adult (37 years) | TSTBS776698 | TSTLB806908 |
2 | 36 | pancreatic alpha primary cell female adult (37 years) | TSTBS047832 | TSTLB577239 |
3 | 2 | pancreatic alpha primary cell female adult (37 years) | TSTBS176830 | TSTLB507930 |
3 | 8 | pancreatic alpha primary cell female adult (37 years) | TSTBS960096 | TSTLB241893 |
1 | 1 | pancreatic alpha primary cell male adult (57 years) | TSTBS093745 | TSTLB015717 |
1 | 8 | pancreatic alpha primary cell male adult (57 years) | TSTBS958743 | TSTLB956096 |
1 | 12 | pancreatic alpha primary cell male adult (57 years) | TSTBS140032 | TSTLB095527 |
1 | 28 | pancreatic alpha primary cell male adult (57 years) | TSTBS936712 | TSTLB050103 |
1 | 31 | pancreatic alpha primary cell male adult (57 years) | TSTBS166721 | TSTLB620070 |
1 | 34 | pancreatic alpha primary cell male adult (57 years) | TSTBS547818 | TSTLB090948 |
1 | 39 | pancreatic alpha primary cell male adult (57 years) | TSTBS520805 | TSTLB727246 |
1 | 47 | pancreatic alpha primary cell male adult (57 years) | TSTBS069384 | TSTLB807869 |
2 | 5 | pancreatic alpha primary cell female adult (37 years) | TSTBS480416 | TSTLB322548 |
2 | 10 | pancreatic alpha primary cell female adult (37 years) | TSTBS939515 | TSTLB312934 |
2 | 12 | pancreatic alpha primary cell female adult (37 years) | TSTBS936161 | TSTLB378687 |
2 | 31 | pancreatic alpha primary cell female adult (37 years) | TSTBS662433 | TSTLB350819 |
2 | 33 | pancreatic alpha primary cell female adult (37 years) | TSTBS192050 | TSTLB170289 |
3 | 5 | pancreatic alpha primary cell female adult (37 years) | TSTBS696581 | TSTLB909932 |
1 | 3 | pancreatic alpha primary cell male adult (57 years) | TSTBS390589 | TSTLB262457 |
1 | 9 | pancreatic alpha primary cell male adult (57 years) | TSTBS314090 | TSTLB060393 |
1 | 13 | pancreatic alpha primary cell male adult (57 years) | TSTBS164816 | TSTLB336146 |
1 | 17 | pancreatic alpha primary cell male adult (57 years) | TSTBS963036 | TSTLB897104 |
1 | 21 | pancreatic alpha primary cell male adult (57 years) | TSTBS580217 | TSTLB476688 |
1 | 27 | pancreatic alpha primary cell male adult (57 years) | TSTBS384621 | TSTLB219633 |
1 | 30 | pancreatic alpha primary cell male adult (57 years) | TSTBS213817 | TSTLB203723 |
1 | 38 | pancreatic alpha primary cell male adult (57 years) | TSTBS294914 | TSTLB612099 |
1 | 45 | pancreatic alpha primary cell male adult (57 years) | TSTBS334311 | TSTLB755719 |
2 | 1 | pancreatic alpha primary cell female adult (37 years) | TSTBS531526 | TSTLB672892 |
2 | 3 | pancreatic alpha primary cell female adult (37 years) | TSTBS009499 | TSTLB482589 |
2 | 8 | pancreatic alpha primary cell female adult (37 years) | TSTBS689894 | TSTLB035402 |
2 | 9 | pancreatic alpha primary cell female adult (37 years) | TSTBS706616 | TSTLB883850 |
2 | 15 | pancreatic alpha primary cell female adult (37 years) | TSTBS716085 | TSTLB618454 |
2 | 25 | pancreatic alpha primary cell female adult (37 years) | TSTBS218733 | TSTLB864531 |
2 | 30 | pancreatic alpha primary cell female adult (37 years) | TSTBS689556 | TSTLB514173 |
2 | 35 | pancreatic alpha primary cell female adult (37 years) | TSTBS895176 | TSTLB798426 |
3 | 1 | pancreatic alpha primary cell female adult (37 years) | TSTBS534282 | TSTLB831239 |
3 | 4 | pancreatic alpha primary cell female adult (37 years) | TSTBS663661 | TSTLB643984 |
2 | 11 | pancreatic alpha primary cell female adult (37 years) | TSTBS292959 | TSTLB999719 |
2 | 14 | pancreatic alpha primary cell female adult (37 years) | TSTBS944726 | TSTLB388161 |
2 | 17 | pancreatic alpha primary cell female adult (37 years) | TSTBS195819 | TSTLB582146 |
2 | 19 | pancreatic alpha primary cell female adult (37 years) | TSTBS444908 | TSTLB084621 |
2 | 22 | pancreatic alpha primary cell female adult (37 years) | TSTBS801002 | TSTLB364768 |
2 | 26 | pancreatic alpha primary cell female adult (37 years) | TSTBS555581 | TSTLB310200 |
2 | 32 | pancreatic alpha primary cell female adult (37 years) | TSTBS395947 | TSTLB318555 |
2 | 38 | pancreatic alpha primary cell female adult (37 years) | TSTBS680052 | TSTLB737326 |
3 | 7 | pancreatic alpha primary cell female adult (37 years) | TSTBS353652 | TSTLB962401 |
3 | 9 | pancreatic alpha primary cell female adult (37 years) | TSTBS734118 | TSTLB693111 |
2 | 24 | pancreatic alpha primary cell female adult (37 years) | TSTBS685213 | TSTLB769212 |
2 | 27 | pancreatic alpha primary cell female adult (37 years) | TSTBS705870 | TSTLB252617 |
2 | 34 | pancreatic alpha primary cell female adult (37 years) | TSTBS655708 | TSTLB865559 |
3 | 3 | pancreatic alpha primary cell female adult (37 years) | TSTBS093010 | TSTLB905223 |
3 | 10 | pancreatic alpha primary cell female adult (37 years) | TSTBS538689 | TSTLB481536 |