Experiment summary for TSTSR662513
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic acinar cell female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- E-MTAB-5061 pancreatic acinar cell sample scRNAseq for T2D individuals
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Size range
- >100
- Strand specificity
- Non-strand-specific
- Platform
- Illumina HiSeq 2000
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- EBI:E-MTAB-5061
- Aliases
- amp-t2d-consortium:E-MTAB-5061_scRNA_acinar_T2D
- Date released
- July 24, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 2 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB759774 |
| 1 | 3 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB285743 |
| 1 | 4 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB207969 |
| 1 | 6 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB151512 |
| 1 | 7 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB086072 |
| 1 | 1 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB605475 |
| 1 | 5 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB889120 |
| 1 | 8 | pancreatic acinar primary cell male adult (57 years) | TSTBS159154 | TSTLB671461 |
| 2 | 1 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB402273 |
| 2 | 3 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB369522 |
| 2 | 5 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB712378 |
| 2 | 8 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB478214 |
| 2 | 2 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB396955 |
| 2 | 4 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB988765 |
| 2 | 6 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB012448 |
| 2 | 7 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB604902 |
| 2 | 9 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB322346 |
| 2 | 10 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB190185 |
| 2 | 11 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB671546 |
| 2 | 12 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB613016 |
| 2 | 13 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB582177 |
| 2 | 14 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB731488 |
| 2 | 15 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB049411 |
| 2 | 16 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB571957 |
| 2 | 17 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB375032 |
| 2 | 18 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB459979 |
| 2 | 19 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB840743 |
| 2 | 20 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB568060 |
| 2 | 21 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB508937 |
| 2 | 22 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB649781 |
| 2 | 23 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB753753 |
| 2 | 24 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB180311 |
| 2 | 25 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB110866 |
| 2 | 26 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB744892 |
| 2 | 27 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB458422 |
| 2 | 28 | pancreatic acinar primary cell female adult (37 years) | TSTBS321786 | TSTLB437915 |
| 3 | 1 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB932563 |
| 3 | 2 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB524545 |
| 3 | 3 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB394357 |
| 3 | 4 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB713017 |
| 3 | 5 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB782994 |
| 3 | 6 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB212012 |
| 3 | 7 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB578971 |
| 3 | 8 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB158604 |
| 3 | 12 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB407596 |
| 3 | 17 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB679861 |
| 3 | 24 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB038145 |
| 4 | 3 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB758400 |
| 4 | 9 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB523934 |
| 4 | 11 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB988419 |
| 3 | 9 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB715152 |
| 3 | 14 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB326428 |
| 3 | 16 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB593953 |
| 3 | 18 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB407411 |
| 3 | 22 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB686171 |
| 4 | 4 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB903219 |
| 3 | 10 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB283099 |
| 3 | 19 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB529150 |
| 3 | 21 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB708563 |
| 4 | 1 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB470089 |
| 4 | 6 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB875920 |
| 4 | 7 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB040851 |
| 4 | 10 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB103759 |
| 3 | 11 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB622493 |
| 3 | 13 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB391584 |
| 4 | 2 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB182307 |
| 4 | 5 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB725589 |
| 4 | 8 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB325432 |
| 4 | 12 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB491895 |
| 3 | 15 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB156263 |
| 3 | 20 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB690790 |
| 3 | 23 | pancreatic acinar primary cell male adult (52 years) | TSTBS076883 | TSTLB424098 |
| 4 | 13 | pancreatic acinar primary cell female adult (55 years) | TSTBS158759 | TSTLB709603 |