Experiment summary for TSTSR692699
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic stellate cell female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- E-MTAB-5061 pancreatic stellate cell sample scRNAseq for T2D individuals
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Size range
- >100
- Strand specificity
- Non-strand-specific
- Platform
- Illumina HiSeq 2000
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- EBI:E-MTAB-5061
- Aliases
- amp-t2d-consortium:E-MTAB-5061_scRNA_stellate_T2D
- Date released
- July 24, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 2 | 8 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB714757 |
| 1 | 1 | pancreatic stellate primary cell male adult (57 years) | TSTBS764428 | TSTLB595344 |
| 2 | 7 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB751512 |
| 2 | 11 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB358454 |
| 3 | 4 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB042930 |
| 3 | 6 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB783333 |
| 3 | 13 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB841766 |
| 4 | 3 | pancreatic stellate primary cell female adult (55 years) | TSTBS212151 | TSTLB858495 |
| 1 | 2 | pancreatic stellate primary cell male adult (57 years) | TSTBS764428 | TSTLB897521 |
| 2 | 1 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB395806 |
| 2 | 5 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB093930 |
| 2 | 9 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB014338 |
| 2 | 10 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB741327 |
| 3 | 1 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB007638 |
| 3 | 10 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB114518 |
| 4 | 2 | pancreatic stellate primary cell female adult (55 years) | TSTBS212151 | TSTLB810937 |
| 4 | 4 | pancreatic stellate primary cell female adult (55 years) | TSTBS212151 | TSTLB795069 |
| 2 | 3 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB405656 |
| 3 | 2 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB154888 |
| 2 | 2 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB114323 |
| 2 | 12 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB805432 |
| 3 | 3 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB473278 |
| 3 | 5 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB605062 |
| 3 | 8 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB347020 |
| 3 | 9 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB071343 |
| 3 | 12 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB463853 |
| 4 | 1 | pancreatic stellate primary cell female adult (55 years) | TSTBS212151 | TSTLB110914 |
| 2 | 4 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB811451 |
| 2 | 6 | pancreatic stellate primary cell female adult (37 years) | TSTBS187622 | TSTLB177937 |
| 3 | 7 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB612017 |
| 3 | 11 | pancreatic stellate primary cell male adult (52 years) | TSTBS389599 | TSTLB505629 |