Experiment summary for TSTSR904632
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic polypeptide-secreting cell female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- E-MTAB-5061 pancreatic polypeptide-secreting cell sample scRNAseq for T2D individuals
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Size range
- >100
- Strand specificity
- Non-strand-specific
- Platform
- Illumina HiSeq 2000
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- EBI:E-MTAB-5061
- Aliases
- amp-t2d-consortium:E-MTAB-5061_scRNA_gamma_T2D
- Date released
- July 24, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 4 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB020493 |
| 1 | 3 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB482486 |
| 1 | 10 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB874479 |
| 1 | 1 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB135156 |
| 1 | 5 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB055363 |
| 1 | 9 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB945611 |
| 1 | 14 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB234804 |
| 1 | 17 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB006764 |
| 1 | 21 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB866483 |
| 1 | 27 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB487126 |
| 1 | 13 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB572328 |
| 1 | 38 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB136928 |
| 1 | 39 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB564557 |
| 1 | 43 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB631819 |
| 1 | 44 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB482367 |
| 1 | 46 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB292347 |
| 1 | 52 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB464249 |
| 1 | 59 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB129235 |
| 1 | 63 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB366204 |
| 1 | 66 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB462755 |
| 2 | 1 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB082902 |
| 1 | 2 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB253286 |
| 1 | 8 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB489220 |
| 1 | 11 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB998112 |
| 1 | 18 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB317596 |
| 1 | 22 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB519242 |
| 1 | 26 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB139660 |
| 1 | 28 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB829079 |
| 1 | 30 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB125292 |
| 1 | 32 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB405111 |
| 1 | 41 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB586631 |
| 1 | 57 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB302281 |
| 1 | 61 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB152082 |
| 2 | 2 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB941836 |
| 2 | 3 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB785539 |
| 2 | 7 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB170530 |
| 3 | 3 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB391141 |
| 3 | 6 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB257625 |
| 3 | 8 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB047582 |
| 4 | 5 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB601505 |
| 4 | 7 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB062818 |
| 4 | 14 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB702337 |
| 4 | 18 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB800495 |
| 1 | 6 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB832507 |
| 1 | 7 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB393990 |
| 1 | 16 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB361448 |
| 1 | 19 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB614536 |
| 1 | 35 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB580805 |
| 1 | 37 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB447228 |
| 1 | 42 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB622065 |
| 1 | 51 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB055201 |
| 1 | 54 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB814814 |
| 1 | 56 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB556784 |
| 1 | 65 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB439919 |
| 2 | 5 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB097752 |
| 3 | 4 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB556950 |
| 3 | 10 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB363140 |
| 4 | 3 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB422325 |
| 4 | 8 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB348836 |
| 4 | 11 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB643593 |
| 4 | 33 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB499342 |
| 1 | 12 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB001190 |
| 1 | 15 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB685461 |
| 1 | 20 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB758343 |
| 1 | 23 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB453730 |
| 1 | 25 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB369336 |
| 1 | 29 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB425301 |
| 1 | 31 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB429759 |
| 1 | 33 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB223112 |
| 1 | 48 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB405877 |
| 1 | 50 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB142387 |
| 1 | 55 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB098308 |
| 1 | 68 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB482257 |
| 1 | 70 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB734348 |
| 2 | 6 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB802434 |
| 3 | 1 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB591802 |
| 3 | 5 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB573429 |
| 3 | 7 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB064085 |
| 4 | 4 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB685996 |
| 4 | 13 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB602645 |
| 4 | 16 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB926796 |
| 4 | 21 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB897922 |
| 4 | 22 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB831167 |
| 4 | 26 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB026377 |
| 1 | 24 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB331498 |
| 1 | 40 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB564725 |
| 1 | 47 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB273767 |
| 1 | 53 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB980911 |
| 1 | 62 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB540117 |
| 1 | 64 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB457393 |
| 1 | 67 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB464759 |
| 2 | 8 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB816325 |
| 3 | 9 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB844122 |
| 4 | 1 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB469223 |
| 4 | 10 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB808152 |
| 4 | 19 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB916488 |
| 4 | 24 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB306098 |
| 4 | 28 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB474758 |
| 4 | 29 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB465208 |
| 4 | 31 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB782602 |
| 1 | 34 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB312600 |
| 1 | 36 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB893835 |
| 1 | 45 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB473339 |
| 1 | 49 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB290562 |
| 1 | 58 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB709167 |
| 1 | 60 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB153370 |
| 1 | 69 | pancreatic polypeptide-secreting primary cell male adult (57 years) | TSTBS784226 | TSTLB437136 |
| 2 | 4 | pancreatic polypeptide-secreting primary cell female adult (37 years) | TSTBS572274 | TSTLB273476 |
| 3 | 2 | pancreatic polypeptide-secreting primary cell male adult (52 years) | TSTBS975472 | TSTLB706140 |
| 4 | 2 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB314177 |
| 4 | 6 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB723124 |
| 4 | 9 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB967920 |
| 4 | 12 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB054336 |
| 4 | 17 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB104195 |
| 4 | 25 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB856374 |
| 4 | 15 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB869525 |
| 4 | 20 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB454289 |
| 4 | 23 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB264784 |
| 4 | 27 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB079213 |
| 4 | 30 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB164563 |
| 4 | 32 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB596974 |
| 4 | 34 | pancreatic polypeptide-secreting primary cell female adult (55 years) | TSTBS389306 | TSTLB123360 |