Experiment summary for TSTSR929530
- Status: released
Summary
- Assay
- single cell isolation followed by RNA-seq (single cell RNA-seq)
- Biosample summary
- Homo sapiens pancreatic beta cell male child (5 years) and male newborn (1 month)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- GEO GSE81547 single cell RNA-seq human pancreatic beta cell for children
- Nucleic acid type
- RNA
- Library starting quantity
- 1cells
- Size range
- >100
- Strand specificity
- Non-strand-specific
- Platform
- Illumina NextSeq 500
Attribution
AMP Consortium
- Award
- U01DK100554 (T2D AMP Consortium)
- Project
- AMP
- External resources
- Aliases
- amp-t2d-consortium:GSE81547_PancreaticBeta_child
- Date released
- July 24, 2018
Anisogenic replicates
| Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
|---|---|---|---|---|
| 1 | 4 | pancreatic beta primary cell male newborn (1 month) | TSTBS248669 | TSTLB811517 |
| 1 | 8 | pancreatic beta primary cell male newborn (1 month) | TSTBS928030 | TSTLB682882 |
| 1 | 11 | pancreatic beta primary cell male newborn (1 month) | TSTBS863855 | TSTLB021594 |
| 1 | 13 | pancreatic beta primary cell male newborn (1 month) | TSTBS185487 | TSTLB525181 |
| 1 | 20 | pancreatic beta primary cell male newborn (1 month) | TSTBS225780 | TSTLB217916 |
| 1 | 25 | pancreatic beta primary cell male newborn (1 month) | TSTBS963482 | TSTLB004200 |
| 1 | 28 | pancreatic beta primary cell male newborn (1 month) | TSTBS437573 | TSTLB834963 |
| 1 | 41 | pancreatic beta primary cell male newborn (1 month) | TSTBS450255 | TSTLB632849 |
| 1 | 45 | pancreatic beta primary cell male newborn (1 month) | TSTBS835581 | TSTLB669803 |
| 2 | 1 | pancreatic beta primary cell male child (5 years) | TSTBS987177 | TSTLB019959 |
| 2 | 11 | pancreatic beta primary cell male child (5 years) | TSTBS037551 | TSTLB054613 |
| 2 | 14 | pancreatic beta primary cell male child (5 years) | TSTBS845927 | TSTLB375233 |
| 2 | 19 | pancreatic beta primary cell male child (5 years) | TSTBS075542 | TSTLB980454 |
| 2 | 32 | pancreatic beta primary cell male child (5 years) | TSTBS689032 | TSTLB463389 |
| 3 | 3 | pancreatic beta primary cell male child (5 years) | TSTBS438735 | TSTLB503975 |
| 3 | 11 | pancreatic beta primary cell male child (5 years) | TSTBS556307 | TSTLB102300 |
| 3 | 19 | pancreatic beta primary cell male child (5 years) | TSTBS448646 | TSTLB179407 |
| 3 | 33 | pancreatic beta primary cell male child (5 years) | TSTBS952817 | TSTLB812185 |
| 1 | 6 | pancreatic beta primary cell male newborn (1 month) | TSTBS065881 | TSTLB653614 |
| 1 | 10 | pancreatic beta primary cell male newborn (1 month) | TSTBS198337 | TSTLB950795 |
| 1 | 15 | pancreatic beta primary cell male newborn (1 month) | TSTBS301637 | TSTLB505760 |
| 1 | 21 | pancreatic beta primary cell male newborn (1 month) | TSTBS834326 | TSTLB478112 |
| 1 | 26 | pancreatic beta primary cell male newborn (1 month) | TSTBS843497 | TSTLB426375 |
| 1 | 39 | pancreatic beta primary cell male newborn (1 month) | TSTBS360293 | TSTLB838985 |
| 1 | 47 | pancreatic beta primary cell male newborn (1 month) | TSTBS480421 | TSTLB368991 |
| 2 | 6 | pancreatic beta primary cell male child (5 years) | TSTBS389763 | TSTLB369372 |
| 2 | 10 | pancreatic beta primary cell male child (5 years) | TSTBS678277 | TSTLB124949 |
| 2 | 13 | pancreatic beta primary cell male child (5 years) | TSTBS783142 | TSTLB643419 |
| 2 | 17 | pancreatic beta primary cell male child (5 years) | TSTBS866544 | TSTLB478958 |
| 2 | 22 | pancreatic beta primary cell male child (5 years) | TSTBS362926 | TSTLB559544 |
| 2 | 26 | pancreatic beta primary cell male child (5 years) | TSTBS515092 | TSTLB627959 |
| 2 | 33 | pancreatic beta primary cell male child (5 years) | TSTBS414322 | TSTLB407811 |
| 3 | 5 | pancreatic beta primary cell male child (5 years) | TSTBS571794 | TSTLB767435 |
| 3 | 8 | pancreatic beta primary cell male child (5 years) | TSTBS100639 | TSTLB571446 |
| 3 | 10 | pancreatic beta primary cell male child (5 years) | TSTBS426589 | TSTLB344724 |
| 3 | 20 | pancreatic beta primary cell male child (5 years) | TSTBS833575 | TSTLB816764 |
| 3 | 24 | pancreatic beta primary cell male child (5 years) | TSTBS080109 | TSTLB344334 |
| 3 | 27 | pancreatic beta primary cell male child (5 years) | TSTBS757339 | TSTLB817013 |
| 3 | 34 | pancreatic beta primary cell male child (5 years) | TSTBS353081 | TSTLB598259 |
| 3 | 39 | pancreatic beta primary cell male child (5 years) | TSTBS864012 | TSTLB091288 |
| 3 | 43 | pancreatic beta primary cell male child (5 years) | TSTBS902007 | TSTLB007724 |
| 1 | 1 | pancreatic beta primary cell male newborn (1 month) | TSTBS174972 | TSTLB637266 |
| 1 | 7 | pancreatic beta primary cell male newborn (1 month) | TSTBS118749 | TSTLB681794 |
| 1 | 19 | pancreatic beta primary cell male newborn (1 month) | TSTBS676154 | TSTLB495047 |
| 1 | 22 | pancreatic beta primary cell male newborn (1 month) | TSTBS397340 | TSTLB164621 |
| 1 | 30 | pancreatic beta primary cell male newborn (1 month) | TSTBS177941 | TSTLB112604 |
| 1 | 32 | pancreatic beta primary cell male newborn (1 month) | TSTBS223815 | TSTLB018718 |
| 1 | 35 | pancreatic beta primary cell male newborn (1 month) | TSTBS288146 | TSTLB894684 |
| 1 | 43 | pancreatic beta primary cell male newborn (1 month) | TSTBS421592 | TSTLB481824 |
| 1 | 46 | pancreatic beta primary cell male newborn (1 month) | TSTBS147889 | TSTLB779604 |
| 1 | 48 | pancreatic beta primary cell male newborn (1 month) | TSTBS456703 | TSTLB941454 |
| 2 | 5 | pancreatic beta primary cell male child (5 years) | TSTBS584918 | TSTLB213954 |
| 2 | 12 | pancreatic beta primary cell male child (5 years) | TSTBS055820 | TSTLB545974 |
| 2 | 16 | pancreatic beta primary cell male child (5 years) | TSTBS095878 | TSTLB063129 |
| 2 | 21 | pancreatic beta primary cell male child (5 years) | TSTBS251416 | TSTLB123148 |
| 2 | 23 | pancreatic beta primary cell male child (5 years) | TSTBS995032 | TSTLB481743 |
| 2 | 29 | pancreatic beta primary cell male child (5 years) | TSTBS480384 | TSTLB669473 |
| 2 | 31 | pancreatic beta primary cell male child (5 years) | TSTBS540625 | TSTLB577478 |
| 2 | 35 | pancreatic beta primary cell male child (5 years) | TSTBS763385 | TSTLB128325 |
| 3 | 4 | pancreatic beta primary cell male child (5 years) | TSTBS765773 | TSTLB142162 |
| 3 | 6 | pancreatic beta primary cell male child (5 years) | TSTBS857011 | TSTLB462930 |
| 3 | 14 | pancreatic beta primary cell male child (5 years) | TSTBS038576 | TSTLB508251 |
| 3 | 16 | pancreatic beta primary cell male child (5 years) | TSTBS920837 | TSTLB114820 |
| 3 | 18 | pancreatic beta primary cell male child (5 years) | TSTBS094357 | TSTLB260485 |
| 3 | 22 | pancreatic beta primary cell male child (5 years) | TSTBS959126 | TSTLB085263 |
| 3 | 31 | pancreatic beta primary cell male child (5 years) | TSTBS872381 | TSTLB063365 |
| 3 | 37 | pancreatic beta primary cell male child (5 years) | TSTBS511473 | TSTLB754266 |
| 3 | 40 | pancreatic beta primary cell male child (5 years) | TSTBS408598 | TSTLB997456 |
| 1 | 2 | pancreatic beta primary cell male newborn (1 month) | TSTBS981258 | TSTLB227249 |
| 1 | 12 | pancreatic beta primary cell male newborn (1 month) | TSTBS278041 | TSTLB149395 |
| 1 | 17 | pancreatic beta primary cell male newborn (1 month) | TSTBS275246 | TSTLB347275 |
| 2 | 3 | pancreatic beta primary cell male child (5 years) | TSTBS770626 | TSTLB709101 |
| 2 | 7 | pancreatic beta primary cell male child (5 years) | TSTBS948099 | TSTLB141971 |
| 2 | 15 | pancreatic beta primary cell male child (5 years) | TSTBS170265 | TSTLB902886 |
| 2 | 24 | pancreatic beta primary cell male child (5 years) | TSTBS091137 | TSTLB375694 |
| 2 | 27 | pancreatic beta primary cell male child (5 years) | TSTBS917264 | TSTLB468797 |
| 2 | 30 | pancreatic beta primary cell male child (5 years) | TSTBS115871 | TSTLB479302 |
| 3 | 2 | pancreatic beta primary cell male child (5 years) | TSTBS286808 | TSTLB655215 |
| 3 | 12 | pancreatic beta primary cell male child (5 years) | TSTBS699897 | TSTLB519560 |
| 3 | 25 | pancreatic beta primary cell male child (5 years) | TSTBS318918 | TSTLB844362 |
| 3 | 30 | pancreatic beta primary cell male child (5 years) | TSTBS868122 | TSTLB998443 |
| 3 | 36 | pancreatic beta primary cell male child (5 years) | TSTBS606604 | TSTLB436007 |
| 3 | 38 | pancreatic beta primary cell male child (5 years) | TSTBS534238 | TSTLB116581 |
| 3 | 42 | pancreatic beta primary cell male child (5 years) | TSTBS951452 | TSTLB276069 |
| 1 | 5 | pancreatic beta primary cell male newborn (1 month) | TSTBS935841 | TSTLB414677 |
| 1 | 18 | pancreatic beta primary cell male newborn (1 month) | TSTBS159396 | TSTLB641356 |
| 1 | 24 | pancreatic beta primary cell male newborn (1 month) | TSTBS859508 | TSTLB608393 |
| 1 | 29 | pancreatic beta primary cell male newborn (1 month) | TSTBS937116 | TSTLB223126 |
| 1 | 33 | pancreatic beta primary cell male newborn (1 month) | TSTBS649454 | TSTLB582717 |
| 1 | 37 | pancreatic beta primary cell male newborn (1 month) | TSTBS531183 | TSTLB354141 |
| 1 | 40 | pancreatic beta primary cell male newborn (1 month) | TSTBS983104 | TSTLB601559 |
| 2 | 4 | pancreatic beta primary cell male child (5 years) | TSTBS165526 | TSTLB224791 |
| 2 | 9 | pancreatic beta primary cell male child (5 years) | TSTBS109518 | TSTLB743834 |
| 2 | 18 | pancreatic beta primary cell male child (5 years) | TSTBS118647 | TSTLB320521 |
| 2 | 20 | pancreatic beta primary cell male child (5 years) | TSTBS021489 | TSTLB814838 |
| 2 | 25 | pancreatic beta primary cell male child (5 years) | TSTBS859828 | TSTLB771667 |
| 3 | 1 | pancreatic beta primary cell male child (5 years) | TSTBS625040 | TSTLB146986 |
| 3 | 9 | pancreatic beta primary cell male child (5 years) | TSTBS457982 | TSTLB608359 |
| 3 | 15 | pancreatic beta primary cell male child (5 years) | TSTBS495835 | TSTLB923821 |
| 3 | 23 | pancreatic beta primary cell male child (5 years) | TSTBS603502 | TSTLB501040 |
| 3 | 28 | pancreatic beta primary cell male child (5 years) | TSTBS928784 | TSTLB901123 |
| 3 | 32 | pancreatic beta primary cell male child (5 years) | TSTBS067045 | TSTLB543840 |
| 1 | 3 | pancreatic beta primary cell male newborn (1 month) | TSTBS582457 | TSTLB420671 |
| 1 | 9 | pancreatic beta primary cell male newborn (1 month) | TSTBS697693 | TSTLB891441 |
| 1 | 14 | pancreatic beta primary cell male newborn (1 month) | TSTBS768930 | TSTLB321643 |
| 1 | 16 | pancreatic beta primary cell male newborn (1 month) | TSTBS102527 | TSTLB901316 |
| 1 | 23 | pancreatic beta primary cell male newborn (1 month) | TSTBS876842 | TSTLB681090 |
| 1 | 27 | pancreatic beta primary cell male newborn (1 month) | TSTBS369089 | TSTLB944160 |
| 1 | 31 | pancreatic beta primary cell male newborn (1 month) | TSTBS362907 | TSTLB131685 |
| 1 | 34 | pancreatic beta primary cell male newborn (1 month) | TSTBS023048 | TSTLB456718 |
| 1 | 36 | pancreatic beta primary cell male newborn (1 month) | TSTBS442738 | TSTLB750262 |
| 1 | 38 | pancreatic beta primary cell male newborn (1 month) | TSTBS650207 | TSTLB730659 |
| 1 | 42 | pancreatic beta primary cell male newborn (1 month) | TSTBS664807 | TSTLB759766 |
| 1 | 44 | pancreatic beta primary cell male newborn (1 month) | TSTBS354227 | TSTLB310230 |
| 2 | 2 | pancreatic beta primary cell male child (5 years) | TSTBS234318 | TSTLB747156 |
| 2 | 8 | pancreatic beta primary cell male child (5 years) | TSTBS715560 | TSTLB522067 |
| 2 | 28 | pancreatic beta primary cell male child (5 years) | TSTBS940177 | TSTLB946851 |
| 2 | 34 | pancreatic beta primary cell male child (5 years) | TSTBS465791 | TSTLB711361 |
| 3 | 7 | pancreatic beta primary cell male child (5 years) | TSTBS263590 | TSTLB427758 |
| 3 | 13 | pancreatic beta primary cell male child (5 years) | TSTBS843109 | TSTLB170872 |
| 3 | 17 | pancreatic beta primary cell male child (5 years) | TSTBS304005 | TSTLB784218 |
| 3 | 21 | pancreatic beta primary cell male child (5 years) | TSTBS101945 | TSTLB853148 |
| 3 | 26 | pancreatic beta primary cell male child (5 years) | TSTBS734311 | TSTLB812831 |
| 3 | 29 | pancreatic beta primary cell male child (5 years) | TSTBS417907 | TSTLB228204 |
| 3 | 35 | pancreatic beta primary cell male child (5 years) | TSTBS165380 | TSTLB966935 |
| 3 | 41 | pancreatic beta primary cell male child (5 years) | TSTBS685570 | TSTLB247894 |