{
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"award": "/awards/1R01DK122607-01/",
"accession": "DLB334VXO",
"documents": [],
"aliases": [
"t1d:EGAS00001003501ATAC_Macrophage_IFN-gamma_6hours_Rep2"
],
"alternate_accessions": [],
"biosample": {
"genetic_modifications": [],
"biosample_term_name": "macrophage",
"aliases": [
"t1d:EGAS00001003501ATAC-EGAS00001002749ChIP_Macrophage_IFN-gamma_6hours_bio2"
],
"status": "released",
"treatments": [],
"schema_version": "20",
"biosample_term_id": "CL:0000235",
"date_created": "2020-04-08T00:17:52.553500+00:00",
"description": "Macrophage IFN-gamma biosample2 6 hours of EGAS00001003501ATAC-EGAS00001002749ChIP",
"references": [],
"source": "/sources/cambridge-nhs/",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"lab": "/labs/kyle-gaulton/",
"award": "/awards/1R01DK122607-01/",
"documents": [],
"donor": {
"age": "27-60",
"ethnicity": "British Caucasian",
"award": "/awards/1R01DK122607-01/",
"siblings": [],
"sex": "unknown",
"life_stage": "unknown",
"parents": [],
"alternate_accessions": [],
"schema_version": "11",
"documents": [],
"age_units": "year",
"status": "released",
"accession": "DDO791OYP",
"date_created": "2020-04-07T21:36:14.566703+00:00",
"organism": {
"scientific_name": "Homo sapiens",
"taxon_id": "9606",
"status": "current",
"schema_version": "4",
"name": "human",
"@id": "/organisms/human/",
"@type": [
"Organism",
"Item"
],
"uuid": "2e5a2453-8f03-45ee-82e4-9b7e6c963f43"
},
"health_status": "Healthy. British Caucasians. 27-60 years old (median: 54), 8 males and 1 female.",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"lab": "/labs/kyle-gaulton/",
"aliases": [
"t1d:EGAS00001003501ATAC-EGAS00001002749ChIP_bloodFrom9HealthAdult"
],
"references": [],
"dbxrefs": [],
"@id": "/human-donors/DDO791OYP/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"uuid": "f173d794-ae7e-43e9-954d-f42d19d44e5c",
"characterizations": [],
"children": []
},
"accession": "DBS997KLH",
"dbxrefs": [],
"alternate_accessions": [],
"biosample_type": "primary cell",
"organism": "/organisms/human/",
"internal_tags": [],
"notes": "Macrophage IFN-gamma biosample2 6 hours of EGAS00001003501ATAC-EGAS00001002749ChIP",
"biosample_synonyms": [
"histiocyte",
"bone marrow-derived macrophage",
"macrophagocyte",
"monocyte-derived macrophage"
],
"organ_slims": [],
"system_slims": [
"immune system"
],
"developmental_slims": [
"mesoderm"
],
"@id": "/biosamples/DBS997KLH/",
"@type": [
"Biosample",
"Item"
],
"uuid": "20c8ec5a-92e7-4345-ae34-25bb68863950",
"sex": "unknown",
"age": "27-60",
"age_units": "year",
"health_status": "Healthy. British Caucasians. 27-60 years old (median: 54), 8 males and 1 female.",
"life_stage": "unknown",
"applied_modifications": [],
"characterizations": [],
"parent_of": [],
"age_display": "27-60 year",
"summary": "Homo sapiens macrophage primary cell (27-60 years)"
},
"dbxrefs": [],
"treatments": [],
"date_created": "2020-04-08T00:28:39.586730+00:00",
"status": "released",
"strand_specificity": false,
"nucleic_acid_term_name": "DNA",
"lab": "/labs/kyle-gaulton/",
"schema_version": "8",
"spikeins_used": [],
"@id": "/libraries/DLB334VXO/",
"@type": [
"Library",
"Item"
],
"uuid": "9a493b12-d40a-45fc-8bfd-a0005b5da229",
"nucleic_acid_term_id": "SO:0000352",
"@context": "/policy/",
"audit": {
"INTERNAL_ACTION": [
{
"category": "validation error: ethnicity",
"detail": "Object /human-donors/DDO791OYP/ has schema error 'British Caucasian' is not one of ['African', 'African American', 'Arab', 'Arab Indian', 'Asian', 'Asian Hawaiian Eskimo', 'Black', 'Black African', 'Caucasian', 'Caucasian Hispanic', 'Chinese', 'European', 'Eskimo', 'Han Chinese', 'Hawaiian', 'Hispanic', 'Indian', 'Unknown', 'Japanese', 'Pacific Islander', 'Mixed', 'Yoruba']",
"level": 30,
"level_name": "INTERNAL_ACTION",
"path": "/human-donors/DDO791OYP/",
"name": "audit_item_schema"
},
{
"category": "validation error",
"detail": "Object /human-donors/DDO791OYP/ has schema error {'age': '27-60', 'ethnicity': 'British Caucasian', 'award': 'a4c194d4-6d5d-4a06-9253-aa4ba723cf4c', 'siblings': [], 'sex': 'unknown', 'life_stage': 'unknown', 'parents': [], 'alternate_accessions': [], 'schema_version': '11', 'documents': [], 'age_units': 'year', 'status': 'released', 'accession': 'DDO791OYP', 'date_created': '2020-04-07T21:36:14.566703+00:00', 'organism': '2e5a2453-8f03-45ee-82e4-9b7e6c963f43', 'health_status': 'Healthy. British Caucasians. 27-60 years old (median: 54), 8 males and 1 female.', 'submitted_by': '1396e9a3-22b2-42e4-9b19-b874944f9981', 'lab': 'bf8edde0-93b0-4609-8b6f-152d441522d9', 'aliases': ['t1d:EGAS00001003501ATAC-EGAS00001002749ChIP_bloodFrom9HealthAdult'], 'references': [], 'dbxrefs': [], 'uuid': 'f173d794-ae7e-43e9-954d-f42d19d44e5c'} is not valid under any of the given schemas",
"level": 30,
"level_name": "INTERNAL_ACTION",
"path": "/human-donors/DDO791OYP/",
"name": "audit_item_schema"
}
]
}
}