{
"accession": "TSTLB188238",
"lab": "/labs/amp-t2d-consortium/",
"status": "released",
"spikeins_used": [],
"schema_version": "8",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"dbxrefs": [],
"alternate_accessions": [],
"nucleic_acid_starting_quantity_units": "cells",
"strand_specificity": false,
"nucleic_acid_starting_quantity": "1",
"award": "/awards/U01DK100554/",
"documents": [],
"biosample": {
"donor": {
"ethnicity": "White",
"references": [],
"date_created": "2018-02-26T23:00:41.873781+00:00",
"parents": [],
"organism": {
"scientific_name": "Homo sapiens",
"taxon_id": "9606",
"status": "current",
"schema_version": "4",
"name": "human",
"@id": "/organisms/human/",
"@type": [
"Organism",
"Item"
],
"uuid": "2e5a2453-8f03-45ee-82e4-9b7e6c963f43"
},
"age": "37",
"accession": "TSTDO850175(T2D-HP-15085)",
"aliases": [
"amp-t2d-consortium:T2D-HP-15085"
],
"lab": "/labs/amp-t2d-consortium/",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"life_stage": "adult",
"award": "/awards/U01DK100554/",
"alternate_accessions": [],
"dbxrefs": [],
"documents": [],
"sex": "female",
"status": "released",
"age_units": "year",
"schema_version": "11",
"siblings": [],
"health_status": "T2D; BMI:39.3; Cultured 4 days",
"@id": "/human-donors/TSTDO850175(T2D-HP-15085)/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"uuid": "376f59dd-83f2-4ae2-894e-86b20aa066db",
"characterizations": [],
"children": []
},
"dbxrefs": [
"GEO:SAMN05217235"
],
"url": "https://www.ncbi.nlm.nih.gov/biosample/SAMN05217235",
"organism": "/organisms/human/",
"submitter_comment": "GEO sample GSM2194544 from GSE83139",
"description": "GEO sample GSM2194544 of pancreatic beta cell",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"documents": [],
"status": "released",
"notes": "GEO sample GSM2194544 from GSE83139",
"biosample_term_name": "pancreatic beta cell",
"lab": "/labs/amp-t2d-consortium/",
"date_created": "2018-02-27T22:40:55.721638+00:00",
"treatments": [],
"biosample_term_id": "CL:0000169",
"internal_tags": [],
"accession": "TSTBS082413",
"biosample_type": "primary cell",
"source": "/sources/iidp-scharp-lacy/",
"references": [],
"schema_version": "20",
"award": "/awards/U01DK100554/",
"genetic_modifications": [],
"alternate_accessions": [],
"aliases": [
"amp-t2d-consortium:SAMN05217235"
],
"biosample_synonyms": [
"insulin-secreting cell",
"pancreatic beta cell",
"pancreatic B-cell",
"B-cell of pancreatic islet",
"pancreatic B cell",
"pancreatic islet core",
"type B enteroendocrine cell",
"beta cell of pancreatic islet"
],
"organ_slims": [
"pancreas",
"epithelium"
],
"system_slims": [
"endocrine system"
],
"developmental_slims": [
"endoderm"
],
"@id": "/biosamples/TSTBS082413/",
"@type": [
"Biosample",
"Item"
],
"uuid": "a4a07a06-ec72-45fd-88c2-ceb3f7852a33",
"sex": "female",
"age": "37",
"age_units": "year",
"health_status": "T2D; BMI:39.3; Cultured 4 days",
"life_stage": "adult",
"applied_modifications": [],
"characterizations": [],
"parent_of": [],
"age_display": "37 year",
"summary": "Homo sapiens pancreatic beta primary cell female adult (37 years)"
},
"treatments": [],
"nucleic_acid_term_name": "RNA",
"date_created": "2018-02-27T23:37:45.433400+00:00",
"aliases": [
"amp-t2d-consortium:GSE83139_scRNA_humanPancreas_T2D_betaCell_lib26012"
],
"@id": "/libraries/TSTLB188238/",
"@type": [
"Library",
"Item"
],
"uuid": "8f993373-f0ee-41da-9afb-d607eeff4dd8",
"nucleic_acid_term_id": "SO:0000356",
"@context": "/policy/",
"audit": {
"INTERNAL_ACTION": [
{
"category": "validation error: ethnicity",
"detail": "Object /human-donors/TSTDO850175(T2D-HP-15085)/ has schema error 'White' is not one of ['African', 'African American', 'Arab', 'Arab Indian', 'Asian', 'Asian Hawaiian Eskimo', 'Black', 'Black African', 'Caucasian', 'Caucasian Hispanic', 'Chinese', 'European', 'Eskimo', 'Han Chinese', 'Hawaiian', 'Hispanic', 'Indian', 'Unknown', 'Japanese', 'Pacific Islander', 'Mixed', 'Yoruba']",
"level": 30,
"level_name": "INTERNAL_ACTION",
"path": "/human-donors/TSTDO850175(T2D-HP-15085)/",
"name": "audit_item_schema"
}
]
}
}