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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
138
target gene predictions
110
accessible chromatin
93
chromatin state
75
gene expression
37
differential activity
28
histone modifications
26
eQTL
24
binding sites
18
variant allelic effects
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
173
September, 2022
59
February, 2024
50
February, 2021
49
March, 2023
42
May, 2021
42
November, 2021
20
January, 2021
19
June, 2020
18
August, 2021
15
March, 2020
10
August, 2017
9
May, 2020
8
January, 2022
7
August, 2018
7
January, 2020
6
October, 2019
4
February, 2020
3
March, 2024
3
November, 2019
2
May, 2022
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
September, 2018
Available data
328
bed bed3+
101
tsv
91
bigWig
82
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
554
Homo sapiens
Biosample type
258
tissue
210
primary cell
78
cell line
8
in vitro differentiated cells
Organ
849
epithelium
493
kidney
374
connective tissue
319
brain
248
pancreas
223
musculature of body
207
vasculature
180
lung
176
heart
176
intestine
171
bodily fluid
164
blood
158
embryo
156
blood vessel
141
limb
130
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
68
stomach
64
adipose tissue
64
bone element
59
artery
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
24
spinal cord
19
spleen
17
lymphatic vessel
17
testis
17
vein
16
nerve
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
490
AMP
42
ENCODE
20
T1D
2
community
Genome assembly (visualization)
427
hg19
194
GRCh38
2
hg18
annotation_type!
Fine-mapped variants
candidate regulatory elements
BIOSAMPLE
TYPE
554 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
histone modifications
eQTL
binding sites
variant allelic effects
sQTL
variant to gene
caQTL
tissue
islet of Langerhans
1
6
3
11
1
13
2
1
2
2
liver
10
4
9
1
1
2
7
1
1
small intestine
17
1
15
1
large intestine
14
1
13
1
pancreas
5
5
3
1
1
1
1
+ See 27 more…
primary cell
hepatocyte
3
8
1
13
4
1
2
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 24 more…
cell line
EndoC_BH1
1
8
8
3
1
HepG2
3
2
2
5
3
HT-29
2
1
1
1
1
HuH-7
1
1
1
1
1
SW480
1
1
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte(AFP)
3
pancreatic ductal cell
3
hepatocyte
1
1
See all biosamples
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