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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
77
accessible chromatin
67
candidate regulatory elements
50
binding sites
49
gene expression
chromatin state
33
differential activity
30
histone modifications
17
eQTL
11
variant allelic effects
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
101
February, 2021
77
September, 2022
53
February, 2024
45
March, 2023
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
10
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
334
bed bed3+
74
tsv
57
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
437
Homo sapiens
Biosample type
201
cell line
135
primary cell
98
tissue
3
in vitro differentiated cells
Organ
906
epithelium
575
kidney
414
connective tissue
358
brain
295
musculature of body
255
pancreas
240
lung
230
intestine
227
vasculature
197
heart
191
bodily fluid
187
embryo
185
limb
182
blood
169
skin of body
167
blood vessel
138
large intestine
138
liver
113
extraembryonic component
100
eye
95
stomach
79
uterus
74
bone element
73
adipose tissue
72
mammary gland
65
prostate gland
64
small intestine
61
artery
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
32
spinal cord
28
spleen
22
lymphatic vessel
22
testis
19
lymphoid tissue
19
ovary
19
thyroid gland
18
nerve
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
397
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
347
hg19
73
GRCh38
annotation_type!
Fine-mapped variants
chromatin state
BIOSAMPLE
TYPE
437 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
differential activity
histone modifications
eQTL
variant allelic effects
sQTL
variant to gene
cell line
K562
23
1
7
2
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
1
GM06990
1
1
2
2
1
GM19240
2
1
1
2
1
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
2
11
1
13
1
2
2
pancreas
5
5
5
1
1
1
1
body of pancreas
5
8
2
1
1
endocrine pancreas
4
7
blood
2
+ See 8 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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