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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
80
target gene predictions
74
chromatin state
27
accessible chromatin
11
gene expression
7
binding sites
7
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
2
caQTL
1
differential activity
Date released
204
September, 2022
85
February, 2021
13
February, 2024
11
November, 2021
6
February, 2020
6
June, 2020
6
May, 2021
5
January, 2020
3
August, 2017
3
March, 2020
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Available data
267
bed bed3+
71
bed bed9
16
bigWig
8
tsv
3
bigBed bed9
Organism
355
Homo sapiens
Biosample type
293
tissue
44
primary cell
16
cell line
2
in vitro differentiated cells
Organ
880
epithelium
630
kidney
413
connective tissue
365
brain
355
musculature of body
306
lung
278
intestine
255
pancreas
234
vasculature
230
heart
225
limb
204
embryo
193
bodily fluid
190
skin of body
183
blood
180
blood vessel
169
large intestine
141
extraembryonic component
135
liver
116
stomach
103
eye
84
small intestine
83
bone element
81
mammary gland
81
uterus
79
adipose tissue
72
adrenal gland
70
placenta
70
prostate gland
61
ureter
60
artery
59
penis
58
lymph node
49
gonad
48
thymus
43
esophagus
40
spinal cord
34
spleen
25
testis
23
lymphoid tissue
23
ovary
22
thyroid gland
21
vein
20
lymphatic vessel
20
nerve
19
mouth
18
skeleton
14
bronchus
13
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
344
AMP
11
ENCODE
Genome assembly (visualization)
347
hg19
90
GRCh38
annotation_type!
Fine-mapped variants
hQTL
histone modifications
variant allelic effects
BIOSAMPLE
TYPE
355 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
muscle of leg
27
14
15
2
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 16 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
skeletal muscle cell
2
1
1
1
+ See 4 more…
cell line
LHCN-M2
2
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
in vitro differentiated cells
myotube
1
1
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