Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
16
accessible chromatin
16
chromatin state
9
gene expression
7
histone modifications
6
binding sites
Fine-mapped variants
3
eQTL
1
target gene predictions
Date released
24
February, 2024
20
September, 2022
5
November, 2021
3
August, 2021
January, 2020
2
January, 2022
1
February, 2020
1
February, 2021
1
November, 2019
1
September, 2018
Available data
30
bed bed3+
21
bigWig
16
bed bed9
10
tsv
Organism
58
Homo sapiens
Biosample type
34
primary cell
15
tissue
8
cell line
1
in vitro differentiated cells
Organ
220
epithelium
109
connective tissue
97
brain
91
kidney
85
musculature of body
80
embryo
80
lung
79
intestine
74
heart
64
vasculature
63
limb
58
uterus
56
blood vessel
56
pancreas
55
liver
53
bodily fluid
51
blood
47
skin of body
43
large intestine
37
extraembryonic component
33
stomach
25
adrenal gland
24
small intestine
23
bone element
20
artery
20
mammary gland
19
placenta
15
adipose tissue
14
esophagus
14
eye
14
prostate gland
13
gonad
13
ureter
12
thymus
11
skeleton
10
penis
10
spinal cord
8
lymph node
8
spleen
7
nerve
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
lymphatic vessel
5
mouth
4
bronchus
3
breast
3
vagina
3
vein
2
bone marrow
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
53
AMP
5
ENCODE
Genome assembly (visualization)
130
hg19
58
GRCh38
2
hg18
annotation_type!
Fine-mapped variants
month_released!
January, 2020
BIOSAMPLE
TYPE
58 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
gene expression
histone modifications
binding sites
eQTL
target gene predictions
primary cell
endothelial cell of hepatic sinusoid
6
4
6
hepatocyte
6
1
5
3
1
hepatic stellate cell
1
1
tissue
liver
2
7
1
breast epithelium
2
right lobe of liver
1
1
breast
1
cell line
HepG2
1
1
4
HuH-7
1
HuH-7.5
1
in vitro differentiated cells
hepatocyte
1
Download