Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
579
histone modifications
569
binding sites
389
target gene predictions
308
candidate regulatory elements
182
chromatin state
159
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
2
variant allelic effects
Date released
1283
February, 2021
515
September, 2022
168
February, 2024
148
June, 2020
October, 2022
62
May, 2021
10
January, 2022
9
August, 2021
9
March, 2023
7
March, 2020
7
May, 2022
5
August, 2017
2
May, 2020
1
February, 2023
1
January, 2020
1
March, 2024
1
November, 2019
Available data
2011
bed bed3+
170
bed bed9
22
tsv
7
bed bed9+
4
bigWig
Organism
2229
Homo sapiens
Biosample type
2563
tissue
2430
primary cell
2229
cell line
470
in vitro differentiated cells
4
stem cell
Organ
186
bodily fluid
176
blood
126
embryo
94
lung
73
brain
69
skin of body
64
uterus
60
lymph node
prostate gland
52
bone element
43
epithelium
40
kidney
35
mammary gland
34
pancreas
33
intestine
33
large intestine
31
connective tissue
27
liver
17
musculature of body
15
penis
11
vasculature
10
pituitary gland
9
eye
9
heart
7
limb
6
blood vessel
6
gonad
6
lymphoid tissue
6
testis
4
artery
4
mouth
3
adipose tissue
3
extraembryonic component
3
placenta
2
lymphatic vessel
2
spinal cord
2
vein
Project
2220
AMP
9
community
Genome assembly (visualization)
2187
hg19
356
GRCh38
1
hg18
annotation_type!
Fine-mapped variants
month_released!
October, 2022
organ_slims!
prostate gland
BIOSAMPLE
TYPE
2229 results
search-icon
table-tab-icon
Clear Filters
histone modifications
binding sites
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S3
55
5
3
A549
1
1
19
21
18
1
H1-hESC
1
1
39
1
1
1
8
K562
1
1
23
7
7
1
MCF-7
2
2
6
9
5
1
+ See 754 more…
See all biosamples
Download