Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
808
candidate regulatory elements
458
target gene predictions
443
chromatin state
140
accessible chromatin
111
eQTL
85
histone modifications
83
gene expression
Fine-mapped variants
39
variant allelic effects
32
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1200
September, 2022
556
February, 2021
58
June, 2020
January, 2020
55
January, 2022
48
May, 2020
46
February, 2020
38
August, 2021
32
March, 2020
31
May, 2021
26
February, 2023
26
March, 2024
25
February, 2024
19
August, 2017
17
November, 2022
10
November, 2019
8
May, 2019
7
April, 2019
October, 2019
4
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1588
bed bed3+
418
bed bed9
113
tsv
67
bigWig
22
bigBed bed9
1
bam
Organism
2214
Homo sapiens
Biosample type
2311
cell line
2216
tissue
2139
primary cell
464
in vitro differentiated cells
4
stem cell
Organ
296
musculature of body
kidney
292
brain
232
intestine
220
limb
191
heart
181
lung
134
large intestine
108
stomach
104
pancreas
98
extraembryonic component
85
connective tissue
80
small intestine
74
adipose tissue
69
eye
66
blood vessel
66
vasculature
62
adrenal gland
61
epithelium
61
ureter
60
placenta
54
liver
48
thymus
39
gonad
35
embryo
35
esophagus
34
spleen
32
artery
32
spinal cord
25
skin of body
22
bone element
21
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2211
AMP
5
ITG
Genome assembly (visualization)
2055
hg19
542
GRCh38
3
hg18
annotation_type!
Fine-mapped variants
month_released!
January, 2020
October, 2019
organ_slims!
kidney
BIOSAMPLE
TYPE
2216 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
histone modifications
gene expression
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
3
1
3
2
1
stomach
40
21
19
3
1
1
1
brain
29
16
17
1
2
3
1
1
1
lung
33
17
16
1
1
muscle of arm
33
16
16
1
+ See 240 more…
See all biosamples
Download