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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • Fine-mapped variants
  • 75chromatin state
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 2590February, 2021
  • 1678September, 2022
  • 384May, 2021
  • 378February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 106January, 2022
  • 101October, 2022
  • 83January, 2020
  • 68March, 2023
  • 64February, 2020
  • 56January, 2021
  • 56March, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 29March, 2025
  • 19April, 2020
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 6084bed bed3+
  • 3494tsv
  • bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9667Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 966ENCODE
  • 641DGA
  • 533AMP
  • 421T1D
  • 405T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 159 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 98CMDGA
  • 79GTEx
  • 67HPAP
  • 34STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4755tissue
  • 2351primary cell
  • 2173cell line
  • 430in vitro differentiated cells
  • 4stem cell
Organ
  • 2870vasculature
  • 2832bodily fluid
  • 2823blood
  • 2810blood vessel
  • 2654vein
  • 908epithelium
  • 575kidney
  • 431connective tissue
  • 365brain
  • 302musculature of body
  • 259pancreas
  • 241lung
  • 234intestine
  • 202heart
  • 188embryo
  • 185limb
  • 170skin of body
  • 145liver
  • 141large intestine
  • 113extraembryonic component
  • 100eye
  • 96stomach
  • 83adipose tissue
  • 79uterus
  • 75bone element
  • 73mammary gland
  • 65prostate gland
  • 65small intestine
  • 64artery
  • 59adrenal gland
  • 57placenta
  • 54lymph node
  • 54penis
  • 51ureter
  • 42gonad
  • 38esophagus
  • 38thymus
  • 32spinal cord
  • 28spleen
  • 22lymphatic vessel
  • 22testis
  • 19lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 18nerve
  • 15mouth
  • 15skeleton
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 11breast
  • 8tongue
  • 8urinary bladder
  • 8vagina
  • 5trachea
  • 3nose
  • 1pericardium
Project
  • 9004AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6061hg19
  • 973GRCh38
  • 4hg18
annotation_type!
  • Fine-mapped variants
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

9715 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372015132
stomach40211311
kidney29142101711
brain2916321121
primary cell
monocyte286181154121
CD8-positive, alpha-beta T cell7530431
endothelial cell3711529122
common myeloid progenitor, CD34-positive2714
B cell171062
cell line
HeLa-S35551
H1-hESC1391128
A5492119112
K5627231121
EndoC_BH11181831
in vitro differentiated cells
neural progenitor cell5515107
hematopoietic multipotent progenitor cell19101111
adipocyte4614114
cardiomyocytes11
embryonic stem cell1161
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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