Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
9
candidate regulatory elements
4
binding sites
4
chromatin state
3
accessible chromatin
2
gene expression
2
histone modifications
Date released
51
February, 2024
12
September, 2022
10
February, 2021
2
June, 2020
2
March, 2024
2
May, 2021
2
November, 2021
January, 2022
1
October, 2022
Available data
76
bed bed3+
4
bed bed9
2
tsv
1
bigWig
Organism
82
Homo sapiens
Biosample type
65
cell line
12
tissue
5
primary cell
Organ
946
epithelium
649
kidney
446
connective tissue
406
brain
365
musculature of body
310
lung
286
intestine
264
pancreas
243
vasculature
230
heart
227
limb
218
bodily fluid
215
embryo
207
blood
201
skin of body
181
blood vessel
172
large intestine
150
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
79
adipose tissue
77
prostate gland
72
adrenal gland
72
placenta
64
penis
64
ureter
62
artery
62
lymph node
49
thymus
47
gonad
42
esophagus
39
spinal cord
32
spleen
24
lymphoid tissue
24
testis
22
ovary
22
thyroid gland
21
lymphatic vessel
21
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
80
AMP
2
ENCODE
Genome assembly (visualization)
80
hg19
57
GRCh38
annotation_type!
Fine-mapped variants
files.file_type!
bigBed bed9
month_released!
January, 2022
November, 2019
BIOSAMPLE
TYPE
82 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
gene expression
histone modifications
cell line
HeLa-S3
55
5
1
3
Ishikawa
1
tissue
uterus
2
3
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
Download