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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1354target gene predictions
  • 977histone modifications
  • 942chromatin state
  • 817binding sites
  • 680gene expression
  • 385accessible chromatin
  • 189eQTL
  • 172differential activity
  • 137variant allelic effects
  • Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 2576February, 2021
  • 2507September, 2022
  • 376May, 2021
  • 340February, 2024
  • 289June, 2020
  • 286September, 2023
  • 111November, 2021
  • 108August, 2021
  • 102January, 2022
  • 102May, 2020
  • 101October, 2022
  • 68March, 2023
  • 64February, 2020
  • 56March, 2020
  • 42May, 2022
  • 40May, 2024
  • 35August, 2017
  • 33November, 2022
  • 30March, 2024
  • 29March, 2025
  • 28January, 2021
  • 24January, 2020
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6084bed bed3+
  • 3494tsv
  • 869bed bed9
  • bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10034Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 966ENCODE
  • 586DGA
  • 380T1D
  • 296AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 147T2DKP
  • 137 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 79GTEx
  • 67CMDGA
  • 55HPAP
  • 34STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5121tissue
  • 2348cell line
  • 2105primary cell
  • 458in vitro differentiated cells
  • 4stem cell
Organ
  • 2871vasculature
  • 2857bodily fluid
  • 2846blood
  • 2814blood vessel
  • 2657vein
  • 782epithelium
  • 616kidney
  • 417connective tissue
  • 410brain
  • 357musculature of body
  • 302lung
  • 278intestine
  • 226heart
  • 221limb
  • 215pancreas
  • 213embryo
  • 199skin of body
  • 171large intestine
  • 143extraembryonic component
  • 136liver
  • 114stomach
  • 86adipose tissue
  • 84mammary gland
  • 82small intestine
  • 82uterus
  • 79bone element
  • 78prostate gland
  • 73eye
  • 71placenta
  • 67adrenal gland
  • 64penis
  • 63artery
  • 62lymph node
  • 61ureter
  • 49gonad
  • 48thymus
  • 43esophagus
  • 40spinal cord
  • 33spleen
  • 26testis
  • 24lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 20nerve
  • 19mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9596AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6393hg19
  • 1455GRCh38
  • 4hg18
annotation_type!
  • Fine-mapped variants
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

10038 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201211322
stomach4021119131
brain291631811121
kidney291421517111
cell line
HeLa-S355531
A549211911821
H1-hESC13911281
K5627231721
MCF-7962531
primary cell
monocyte28611524121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753013
B cell171082
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell1910110111
adipocyte4616113
embryonic stem cell11516
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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