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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1550candidate regulatory elements
  • 1282target gene predictions
  • 971histone modifications
  • 867chromatin state
  • 863accessible chromatin
  • 810binding sites
  • 487gene expression
  • 185eQTL
  • 125variant allelic effects
  • 116differential activity
  • Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 2402February, 2021
  • 2286September, 2022
  • 389May, 2021
  • 377February, 2024
  • 330November, 2021
  • 274June, 2020
  • 146September, 2023
  • 136May, 2020
  • 105January, 2022
  • 100August, 2021
  • 99October, 2022
  • 75January, 2020
  • 68March, 2023
  • 56January, 2021
  • 55February, 2020
  • 53March, 2020
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 29March, 2025
  • 28March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 8May, 2019
  • 7April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5773bed bed3+
  • 3243tsv
  • 792bed bed9
  • 510bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 26csv
  • 21txt
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9884Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2274EpiMap
  • 1822ChIP-Atlas
  • 875ENCODE
  • 531AMP
  • 500DGA
  • 420T1D
  • 403T2DKP
  • 219BLUEPRINT
  • 1744DN
  • 159 T2DKP
  • 141KPMP
  • 110T2D
  • 100eQTLCatalogue
  • 98CMDGA
  • 77GTEx
  • 67HPAP
  • 34STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4940tissue
  • 2311cell line
  • 2206primary cell
  • 469in vitro differentiated cells
  • 4stem cell
Organ
  • 2902vasculature
  • 2857bodily fluid
  • 2846blood
  • 2837blood vessel
  • 2658vein
  • 958epithelium
  • kidney
  • 472connective tissue
  • 431brain
  • 373musculature of body
  • 311lung
  • 289intestine
  • 272pancreas
  • 248heart
  • 235limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 159liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 91adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 72artery
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 40spinal cord
  • 34spleen
  • 26testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 22nerve
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9364AMP
  • 330ENCODE
  • 141KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6543hg19
  • 1732GRCh38
  • 4hg18
annotation_type!
  • Fine-mapped variants
organ_slims!
  • kidney
BIOSAMPLE
TYPE

9932 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
variant allelic effects
differential activity
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201215132
stomach4021119311
brain291631821121
lung33171611
cell line
HeLa-S355531
A549211911812
H1-hESC13911128
K5627231712
MCF-7962513
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
endothelial cell3711529122
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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