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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
target gene predictions
69
accessible chromatin
66
candidate regulatory elements
49
gene expression
39
chromatin state
33
differential activity
17
eQTL
11
variant allelic effects
6
histone modifications
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
107
September, 2022
52
February, 2021
45
March, 2023
35
May, 2021
25
February, 2024
22
November, 2021
20
January, 2021
8
August, 2021
7
August, 2018
7
March, 2020
6
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
232
bed bed3+
74
tsv
59
bigWig
34
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
369
Homo sapiens
Biosample type
202
tissue
130
primary cell
34
cell line
3
in vitro differentiated cells
Organ
959
epithelium
652
kidney
462
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
260
vasculature
248
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
325
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
277
hg19
85
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
369 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
sQTL
variant to gene
tissue
small intestine
17
1
29
15
1
islet of Langerhans
1
6
11
3
13
1
1
2
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
5
8
2
4
1
1
endocrine pancreas
4
7
4
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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