Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
target gene predictions
49
candidate regulatory elements
27
chromatin state
19
accessible chromatin
Fine-mapped variants
8
binding sites
7
eQTL
7
gene expression
4
histone modifications
4
variant allelic effects
Date released
75
September, 2022
51
February, 2024
40
February, 2021
8
June, 2020
6
May, 2020
5
February, 2020
4
January, 2020
4
January, 2022
4
May, 2021
3
March, 2024
2
November, 2019
2
November, 2021
2
October, 2022
Available data
165
bed bed3+
27
bed bed9
11
bigWig
10
tsv
2
bigBed bed9
Organism
206
Homo sapiens
Biosample type
121
tissue
75
cell line
10
primary cell
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
204
AMP
2
ENCODE
Genome assembly (visualization)
195
hg19
97
GRCh38
annotation_type!
Fine-mapped variants
organ_slims!
musculature of body
BIOSAMPLE
TYPE
206 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
histone modifications
variant allelic effects
tissue
spinal cord
8
14
7
1
1
tibial nerve
3
6
4
3
2
2
2
tibial artery
2
3
3
3
2
1
2
lower leg skin
2
6
2
uterus
2
3
1
1
1
1
+ See 16 more…
cell line
HeLa-S3
55
5
3
1
GM23248
1
2
1
1
1
1
spinal cord
1
2
Ishikawa
1
primary cell
astrocyte of the spinal cord
1
2
1
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
fibroblast of arm
1
See all biosamples
Download