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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 944chromatin state
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 93binding sites
  • Fine-mapped variants
  • 74accessible chromatin
  • 13caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 2499September, 2022
  • 1021February, 2021
  • 324February, 2024
  • 286September, 2023
  • 243May, 2021
  • 155May, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 68March, 2023
  • 64February, 2020
  • 56March, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 29March, 2025
  • 28January, 2021
  • 24January, 2020
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3551bed bed3+
  • 3494tsv
  • 869bed bed9
  • 108txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 7990Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 960ENCODE
  • 573DGA
  • 281KPMP
  • 262AMP
  • 252T1D
  • 1744DN
  • 148T2DKP
  • 126 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 79GTEx
  • 55HPAP
  • 34STARNET
  • 26FNIH_projects-heart
  • 22CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 4927tissue
  • 1805primary cell
  • 1031cell line
  • 269in vitro differentiated cells
  • 4stem cell
Organ
  • 2845vasculature
  • 2794blood vessel
  • 2793bodily fluid
  • 2784blood
  • 2654vein
  • 688epithelium
  • 594kidney
  • 342connective tissue
  • 333brain
  • 333musculature of body
  • 290lung
  • 255intestine
  • 211heart
  • 211limb
  • 199pancreas
  • 180embryo
  • 164skin of body
  • 154large intestine
  • 130extraembryonic component
  • 110liver
  • 110stomach
  • 81adipose tissue
  • 81small intestine
  • 75uterus
  • 66adrenal gland
  • 66mammary gland
  • 64placenta
  • 61bone element
  • 60ureter
  • 58prostate gland
  • 51artery
  • 51penis
  • 45thymus
  • 42eye
  • 42gonad
  • 41esophagus
  • 40lymph node
  • 37spinal cord
  • 31spleen
  • 21lymphoid tissue
  • 21ovary
  • 21testis
  • 21thyroid gland
  • 19nerve
  • 18lymphatic vessel
  • 18mouth
  • 12breast
  • 12pituitary gland
  • 11bronchus
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 7bone marrow
  • 3nose
  • 1pericardium
Project
  • 7577AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4393hg19
  • 1343GRCh38
  • 4hg18
annotation_type!
  • Fine-mapped variants
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

8038 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
gene expression
eQTL
differential activity
variant allelic effects
binding sites
accessible chromatin
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37202132
stomach40211911
kidney291416711
lung33171611
primary cell
common myeloid progenitor, CD34-positive271413
B cell1710823
CD4-positive, alpha-beta memory T cell1499
CD14-positive monocyte8194
monocyte2154211
cell line
HeLa-S355531
A5492119181
H1-hESC139181
K56272371
MCF-79651
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910101
neural progenitor cell5547
adipocyte4661
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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