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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 944chromatin state
  • 685gene expression
  • 484differential activity
  • 397accessible chromatin
  • 180eQTL
  • 141variant allelic effects
  • 93binding sites
  • Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2499September, 2022
  • 1984July, 2026
  • 1021February, 2021
  • 320May, 2026
  • 319February, 2024
  • 286September, 2023
  • 243May, 2021
  • 155May, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 81August, 2021
  • 68March, 2023
  • 64February, 2020
  • 56March, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 19April, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5535bed bed3+
  • 3479tsv
  • 869bed bed9
  • 112txt
  • 90bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 10283Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 573DGA
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 262AMP
  • 252T1D
  • 1744DN
  • 148T2DKP
  • 133CATlas
  • 126 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 98BLUEPRINT
  • 79GTEx
  • 55HPAP
  • 26FNIH_projects-heart
  • 22CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 5563tissue
  • 3211primary cell
  • 1238cell line
  • 313in vitro differentiated cells
  • 4stem cell
Organ
  • 3303blood
  • 2836vasculature
  • 2809blood vessel
  • 2789bodily fluid
  • 2655vein
  • 769brain
  • 698kidney
  • 681epithelium
  • 442heart
  • 419lung
  • 381connective tissue
  • 336musculature of body
  • 324intestine
  • 256skin of body
  • 241pancreas
  • 211limb
  • 206large intestine
  • 188liver
  • 180embryo
  • 158extraembryonic component
  • 131stomach
  • 126adipose tissue
  • 111muscle organ
  • 95adrenal gland
  • 94eye
  • 94small intestine
  • 89thymus
  • 88placenta
  • 85uterus
  • 83mammary gland
  • 78bone element
  • 69ureter
  • 67prostate gland
  • 61artery
  • 60__MARKER__
  • 60spleen
  • 56gonad
  • 51penis
  • 45thyroid gland
  • 44esophagus
  • 43spinal cord
  • 40lymph node
  • 30ovary
  • 26testis
  • 21lymphoid tissue
  • 20mouth
  • 19nerve
  • 16skeleton
  • 15lymphatic vessel
  • 14breast
  • 12pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11bronchus
  • 11tongue
  • 7bone marrow
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 9866AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 4393hg19
  • 3327GRCh38
  • 4hg18
annotation_type!
  • Fine-mapped variants
software_used.software.name!
  • macs
BIOSAMPLE
TYPE

10331 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
chromatin state
gene expression
differential activity
accessible chromatin
eQTL
variant allelic effects
binding sites
caQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383721412
stomach42401911
head of caudate nucleus86
muscle of arm3333161
primary cell
fibroblast2831024261
endothelial cell1739258223
T-cell644
common myeloid progenitor, CD34-positive262713
CD4-positive, alpha-beta T cell5283
cell line
A5493321181
HeLa-S359531
H1-hESC391181
K56230771
MCF-713951
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219101
neural progenitor cell6547
adipocyte7461
cardiomyocytes11
endodermal cell442
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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