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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 876candidate regulatory elements
  • 817binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 2413February, 2021
  • 846September, 2022
  • 333November, 2021
  • 312February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 45March, 2020
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 29March, 2025
  • 26February, 2020
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 13March, 2023
  • 9May, 2019
  • 8April, 2019
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 4414bed bed3+
  • 2821tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 8150Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 938ENCODE
  • 833EpiMap
  • 438DGA
  • 425AMP
  • 402T2DKP
  • 327T1D
  • 181BLUEPRINT
  • 1744DN
  • 115 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 98CMDGA
  • 34STARNET
  • 26FNIH_projects-heart
  • 24GTEx
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4209tissue
  • 1973cell line
  • 1684primary cell
  • 326in vitro differentiated cells
  • 4stem cell
Organ
  • 2819vasculature
  • 2805bodily fluid
  • 2799blood
  • 2775blood vessel
  • 2653vein
  • 591epithelium
  • 337connective tissue
  • 300kidney
  • 292brain
  • 226musculature of body
  • 176intestine
  • 170lung
  • 166pancreas
  • 155heart
  • 151embryo
  • 138limb
  • 134skin of body
  • 112liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 62adipose tissue
  • 59mammary gland
  • 57bone element
  • 52artery
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 23spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17testis
  • 14nerve
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Project
  • 7658AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5248hg19
  • 1837GRCh38
  • 4hg18
annotation_type!
  • Fine-mapped variants
software_used.software.name!
  • r
BIOSAMPLE
TYPE

8198 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
eQTL
variant allelic effects
differential activity
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart121518112
stomach11932121
kidney2161015111
brain318213121
cell line
HeLa-S332152
H1-hESC111238
K5621711217
A5491181321
breast cancer cell119
primary cell
monocyte8618124121
CD8-positive, alpha-beta T cell301475
endothelial cell115327122
fibroblast1631426
macrophage1233931
in vitro differentiated cells
neural progenitor cell1541011
hematopoietic multipotent progenitor cell110191
adipocyte164214
embryonic stem cell15611
T-cell acute lymphoblastic leukemia53
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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