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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
chromatin state
accessible chromatin
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
65
September, 2022
41
February, 2021
5
May, 2021
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
Available data
118
bed bed3+
2
tsv
Organism
122
Homo sapiens
Biosample type
98
tissue
21
cell line
3
primary cell
Organ
641
epithelium
518
kidney
336
brain
293
connective tissue
267
musculature of body
216
lung
203
intestine
190
pancreas
176
vasculature
173
heart
172
limb
162
embryo
138
skin of body
134
blood vessel
133
bodily fluid
125
blood
122
large intestine
102
liver
101
extraembryonic component
87
stomach
72
uterus
70
adipose tissue
61
small intestine
53
mammary gland
52
adrenal gland
52
prostate gland
51
bone element
50
artery
50
placenta
47
ureter
44
penis
35
eye
35
thymus
34
esophagus
34
gonad
34
lymph node
31
spinal cord
25
spleen
18
nerve
17
lymphoid tissue
17
ovary
17
testis
17
thyroid gland
14
mouth
13
lymphatic vessel
13
pituitary gland
13
vein
10
breast
9
bronchus
8
vagina
7
bone marrow
7
skeleton
7
tongue
7
urinary bladder
2
nose
2
trachea
1
pericardium
Project
119
AMP
3
ENCODE
Genome assembly (visualization)
118
hg19
7
GRCh38
annotation_type!
accessible chromatin
binding sites
chromatin state
month_released!
May, 2019
BIOSAMPLE
TYPE
122 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
1
sigmoid colon
10
7
transverse colon
8
5
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 6 more…
cell line
HCT116
2
3
HT-29
2
2
1
SW480
2
1
1
RKO
1
1
colon epithelial cell
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
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