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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
138
target gene predictions
accessible chromatin
93
chromatin state
75
gene expression
37
differential activity
28
histone modifications
26
eQTL
24
binding sites
18
variant allelic effects
8
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
169
September, 2022
51
March, 2023
49
February, 2021
35
February, 2024
34
May, 2021
21
March, 2020
18
August, 2021
16
November, 2021
10
August, 2017
10
January, 2021
8
January, 2022
7
August, 2018
7
May, 2020
4
February, 2020
3
January, 2020
3
March, 2024
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
May, 2022
Available data
220
bed bed3+
107
tsv
82
bed bed9
16
bigWig
7
bigBed narrowPeak
6
csv
3
bigBed bed9
1
bam
Organism
452
Homo sapiens
Biosample type
236
tissue
145
primary cell
63
cell line
8
in vitro differentiated cells
Organ
637
epithelium
443
kidney
313
brain
292
connective tissue
202
musculature of body
188
pancreas
180
vasculature
165
lung
159
bodily fluid
159
heart
155
intestine
152
blood
146
embryo
139
blood vessel
130
limb
116
skin of body
109
liver
95
large intestine
78
extraembryonic component
71
uterus
63
adipose tissue
60
stomach
54
artery
52
mammary gland
49
bone element
46
prostate gland
44
small intestine
40
placenta
38
adrenal gland
33
lymph node
33
penis
32
eye
29
ureter
28
gonad
27
thymus
25
spinal cord
24
esophagus
17
spleen
16
nerve
15
testis
15
vein
13
lymphatic vessel
13
lymphoid tissue
13
ovary
13
pituitary gland
13
thyroid gland
10
mouth
9
bone marrow
9
bronchus
7
breast
6
skeleton
6
urinary bladder
6
vagina
5
tongue
4
trachea
2
nose
1
pericardium
Project
424
AMP
16
ENCODE
10
T1D
2
community
Genome assembly (visualization)
323
hg19
138
GRCh38
2
hg18
annotation_type!
accessible chromatin
candidate regulatory elements
BIOSAMPLE
TYPE
452 results
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Clear Filters
target gene predictions
chromatin state
gene expression
differential activity
histone modifications
eQTL
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
caQTL
tissue
islet of Langerhans
1
3
11
1
13
2
1
2
2
2
small intestine
17
15
1
liver
10
9
1
1
2
7
1
1
large intestine
14
13
1
body of pancreas
5
4
2
1
1
3
+ See 19 more…
primary cell
hepatocyte
3
1
13
4
1
2
pancreatic ductal cell
3
3
3
2
1
1
pancreatic delta cell
4
3
3
1
endothelial cell of hepatic sinusoid
4
6
pancreatic acinar cell
3
3
3
1
+ See 23 more…
cell line
EndoC_BH1
1
8
3
1
HepG2
3
2
5
3
HT-29
2
1
1
1
HCT116
3
1
HuH-7
1
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte(AFP)
3
pancreatic ductal cell
3
hepatocyte
1
1
See all biosamples
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