Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
accessible chromatin
367
target gene predictions
321
candidate regulatory elements
209
histone modifications
193
chromatin state
152
differential activity
99
binding sites
81
variant allelic effects
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
470
September, 2022
450
February, 2021
281
September, 2023
239
May, 2021
116
February, 2024
111
November, 2021
55
March, 2023
39
May, 2020
31
October, 2022
28
August, 2021
28
January, 2021
27
May, 2022
16
February, 2020
9
August, 2018
6
August, 2017
5
March, 2020
4
February, 2023
2
January, 2020
2
October, 2019
1
January, 2022
1
July, 2020
1
March, 2024
1
November, 2020
Available data
1095
bed bed3+
589
tsv
160
bed bed9
108
txt
27
bed bed9+
16
bigWig
7
bigBed narrowPeak
4
bigBed bed9
Organism
1923
Homo sapiens
Biosample type
2307
tissue
2058
cell line
1923
primary cell
371
in vitro differentiated cells
3
stem cell
Organ
659
epithelium
286
kidney
215
connective tissue
144
vasculature
97
blood vessel
93
skin of body
89
pancreas
46
liver
41
mammary gland
40
penis
34
extraembryonic component
31
musculature of body
26
brain
25
artery
25
heart
25
lung
embryo
18
vein
16
eye
14
lymphatic vessel
13
bronchus
12
bone element
12
intestine
11
bone marrow
10
prostate gland
8
blood
8
bodily fluid
8
esophagus
7
placenta
6
stomach
5
adrenal gland
4
mouth
4
spinal cord
4
trachea
3
large intestine
3
uterus
2
small intestine
2
thyroid gland
1
adipose tissue
1
gonad
1
limb
1
ovary
1
pericardium
Project
1501
AMP
281
KPMP
111
ENCODE
30
T1D
Genome assembly (visualization)
1293
hg19
386
GRCh38
annotation_type!
accessible chromatin
eQTL
files.file_type!
bed gappedPeak
organ_slims!
embryo
BIOSAMPLE
TYPE
1923 results
search-icon
table-tab-icon
Clear Filters
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
2
86
1
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
5
7
30
1
B cell
2
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 396 more…
See all biosamples
Download