Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
gene expression
369
target gene predictions
326
candidate regulatory elements
207
histone modifications
195
chromatin state
152
differential activity
98
binding sites
81
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
479
September, 2022
327
February, 2021
175
May, 2021
111
November, 2021
110
September, 2023
74
February, 2024
42
March, 2023
38
May, 2020
36
January, 2022
31
October, 2022
27
January, 2021
26
May, 2022
6
August, 2017
4
August, 2021
4
February, 2023
2
January, 2020
2
May, 2024
2
October, 2019
1
March, 2020
Available data
1104
bed bed3+
163
bed bed9
154
tsv
26
bed bed9+
7
bigBed narrowPeak
7
bigWig
4
bigBed bed9
Organism
1497
Homo sapiens
Biosample type
2335
tissue
2120
cell line
1497
primary cell
327
in vitro differentiated cells
4
stem cell
Organ
425
epithelium
190
connective tissue
114
vasculature
97
kidney
93
skin of body
78
blood vessel
65
pancreas
41
mammary gland
40
penis
34
extraembryonic component
27
liver
27
musculature of body
26
brain
25
lung
21
heart
20
artery
18
embryo
18
vein
16
eye
13
bronchus
bone element
12
intestine
bone marrow
11
lymphatic vessel
10
prostate gland
8
blood
8
bodily fluid
8
esophagus
7
placenta
6
stomach
5
adrenal gland
4
mouth
4
spinal cord
4
trachea
3
large intestine
3
uterus
2
gonad
2
small intestine
2
thyroid gland
1
limb
1
ovary
1
testis
Project
1245
AMP
111
ENCODE
110
KPMP
29
T1D
2
community
Genome assembly (visualization)
1296
hg19
415
GRCh38
annotation_type!
accessible chromatin
gene expression
organ_slims!
bone element
bone marrow
BIOSAMPLE
TYPE
1497 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
5
7
30
1
B cell
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 331 more…
See all biosamples
Download