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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
gene expression
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
1
March, 2020
1
October, 2022
Available data
127
bed bed3+
33
bed bed9
Organism
162
Homo sapiens
Biosample type
129
tissue
30
cell line
3
primary cell
Organ
494
epithelium
405
brain
400
kidney
337
musculature of body
331
connective tissue
295
lung
265
intestine
219
limb
210
heart
205
bodily fluid
197
vasculature
194
blood
193
embryo
189
skin of body
164
pancreas
162
large intestine
153
blood vessel
137
extraembryonic component
110
liver
109
stomach
81
small intestine
80
mammary gland
78
uterus
72
prostate gland
70
bone element
69
adipose tissue
69
placenta
65
adrenal gland
61
penis
60
ureter
56
artery
54
lymph node
49
eye
47
thymus
43
gonad
40
spinal cord
39
esophagus
31
spleen
23
testis
21
lymphoid tissue
20
nerve
20
ovary
20
thyroid gland
20
vein
17
lymphatic vessel
17
mouth
13
bronchus
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
Project
159
AMP
3
ENCODE
Genome assembly (visualization)
160
hg19
40
GRCh38
annotation_type!
accessible chromatin
gene expression
month_released!
September, 2018
BIOSAMPLE
TYPE
162 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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