Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
71
chromatin state
accessible chromatin
9
binding sites
histone modifications
1
eQTL
1
gene expression
1
variant allelic effects
Date released
210
September, 2022
66
February, 2021
4
May, 2021
4
October, 2022
3
November, 2021
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
220
bed bed3+
70
bed bed9
1
tsv
Organism
292
Homo sapiens
Biosample type
178
tissue
89
cell line
25
primary cell
Organ
709
epithelium
596
kidney
376
brain
347
connective tissue
341
musculature of body
292
lung
260
intestine
223
heart
222
limb
222
vasculature
206
pancreas
192
embryo
181
bodily fluid
178
skin of body
172
blood vessel
171
blood
159
large intestine
132
extraembryonic component
118
liver
stomach
81
adipose tissue
81
small intestine
78
uterus
75
mammary gland
68
bone element
66
adrenal gland
66
placenta
66
prostate gland
60
ureter
59
artery
56
penis
50
lymph node
46
eye
46
thymus
44
gonad
41
esophagus
41
spinal cord
32
spleen
23
testis
22
nerve
21
lymphoid tissue
ovary
21
thyroid gland
20
vein
18
mouth
16
lymphatic vessel
12
breast
12
bronchus
12
pituitary gland
10
skeleton
10
vagina
9
bone marrow
9
tongue
9
urinary bladder
3
nose
2
trachea
1
pericardium
Project
289
AMP
3
ENCODE
Genome assembly (visualization)
290
hg19
74
GRCh38
annotation_type!
accessible chromatin
histone modifications
organ_slims!
ovary
stomach
BIOSAMPLE
TYPE
292 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
gene expression
variant allelic effects
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
upper lobe of left lung
7
3
3
1
cell line
A549
21
19
18
2
IMR-90
2
2
1
2
WI38
5
1
1
PC-9
2
2
1
1
NCI-H460 cell
1
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
4
2
lung microvascular endothelial cell
3
1
1
type II pneumocyte
2
1
type I pneumocyte
1
See all biosamples
Download