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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
681
binding sites
678
histone modifications
464
target gene predictions
406
candidate regulatory elements
235
chromatin state
accessible chromatin
95
gene expression
10
eQTL
10
variant allelic effects
1
differential activity
1
representative DNase hypersensitivity sites
Date released
1491
February, 2021
647
September, 2022
195
February, 2024
90
May, 2021
70
October, 2022
30
August, 2021
17
March, 2020
10
January, 2022
9
August, 2017
9
May, 2020
7
May, 2022
4
September, 2023
1
February, 2023
1
March, 2024
Available data
2247
bed bed3+
219
bed bed9
97
tsv
24
csv
7
bed bed9+
5
bigBed bed9
Organism
2581
Homo sapiens
Biosample type
2454
tissue
2180
cell line
1984
primary cell
401
in vitro differentiated cells
4
stem cell
Organ
194
bodily fluid
184
blood
151
embryo
92
lung
73
skin of body
71
brain
65
uterus
63
connective tissue
54
lymph node
49
prostate gland
48
bone element
46
epithelium
37
mammary gland
36
kidney
32
liver
30
intestine
30
large intestine
27
pancreas
19
penis
17
musculature of body
10
pituitary gland
10
vasculature
8
extraembryonic component
8
eye
7
heart
6
gonad
6
limb
6
testis
5
blood vessel
5
lymphoid tissue
4
mouth
3
adipose tissue
3
artery
3
lymphatic vessel
3
nose
3
placenta
2
spinal cord
2
vein
Project
2581
AMP
community
Genome assembly (visualization)
2472
hg19
409
GRCh38
1
hg18
annotation_type!
accessible chromatin
other
award.project!
community
BIOSAMPLE
TYPE
2581 results
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Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
gene expression
eQTL
variant allelic effects
differential activity
representative DNase hypersensitivity sites
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
H1-hESC
2
1
39
1
1
8
K562
2
1
23
7
7
MCF-7
3
2
6
9
5
+ See 749 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
1
10
19
10
1
neural progenitor cell
15
5
5
4
7
adipocyte
1
1
6
4
6
1
cardiomyocytes
11
mesenchymal stem cell
1
1
3
3
2
+ See 109 more…
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