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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
23
candidate regulatory elements
21
target gene predictions
14
histone modifications
13
binding sites
3
variant allelic effects
2
chromatin state
1
caQTL
Date released
32
September, 2022
21
February, 2021
7
February, 2024
4
August, 2021
3
March, 2020
3
May, 2021
2
August, 2017
2
May, 2020
1
May, 2022
1
November, 2021
1
October, 2022
Available data
77
bed bed3+
28
tsv
14
bed bed9
9
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
77
Homo sapiens
Biosample type
31
tissue
22
cell line
21
primary cell
3
in vitro differentiated cells
Organ
338
epithelium
267
brain
260
kidney
254
musculature of body
241
connective tissue
224
lung
207
intestine
177
bodily fluid
169
blood
166
embryo
155
limb
152
skin of body
147
heart
127
large intestine
127
vasculature
103
extraembryonic component
97
blood vessel
96
pancreas
85
stomach
77
liver
73
uterus
66
mammary gland
61
small intestine
58
prostate gland
55
bone element
52
placenta
51
penis
50
adrenal gland
47
ureter
46
lymph node
42
adipose tissue
39
eye
36
thymus
35
artery
32
gonad
29
esophagus
27
spinal cord
24
spleen
17
testis
16
lymphoid tissue
15
ovary
15
thyroid gland
15
vein
12
mouth
11
bronchus
nerve
11
pituitary gland
10
lymphatic vessel
9
bone marrow
8
breast
7
skeleton
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
76
AMP
1
ENCODE
Genome assembly (visualization)
76
hg19
14
GRCh38
1
hg18
annotation_type!
accessible chromatin
pQTL
organ_slims!
nerve
BIOSAMPLE
TYPE
77 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
tissue
liver
13
10
2
1
1
1
right lobe of liver
2
1
cell line
HepG2
2
3
5
3
1
HuH-7
1
1
1
1
HuH-7.5
1
1
hepatic stellate cell
1
1
primary cell
hepatocyte
1
3
4
1
2
endothelial cell of hepatic sinusoid
6
hepatic stellate cell
1
1
1
Liver fetal (hepatocyte)
1
in vitro differentiated cells
hepatocyte
2
1
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