Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 869chromatin state
  • accessible chromatin
  • 285target gene predictions
  • 126eQTL
  • 105histone modifications
  • 72Fine-mapped variants
  • 38candidate regulatory elements
  • 9gene expression
  • 7caQTL
  • 6binding sites
Date released
  • 838September, 2022
  • 194February, 2024
  • 111November, 2021
  • 101January, 2022
  • 84May, 2021
  • 72March, 2020
  • 38May, 2024
  • 25February, 2020
  • 16August, 2021
  • 9May, 2019
  • 7April, 2019
  • 6January, 2020
  • 5February, 2023
  • 5October, 2019
  • 3May, 2020
  • 2October, 2022
  • 1November, 2019
Available data
  • 864bed bed9
  • 548bed bed3+
  • 106tsv
  • 31bigBed bed9
  • 11bigWig
Organism
  • 1516Homo sapiens
Collection Tags
  • 833EpiMap
  • 187T1D
  • 1744DN
  • 138AMP
  • 115T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 96GTEx
  • 84BLUEPRINT
  • 26FNIH_projects-heart
  • 20 T2DKP
  • 20DGA
  • 12FNIH_projects-liver
  • 5CMDGA
Biosample type
  • 645tissue
  • 463primary cell
  • 361cell line
  • 48in vitro differentiated cells
Organ
  • 131brain
  • 128epithelium
  • 83musculature of body
  • 82connective tissue
  • 78embryo
  • 78kidney
  • 74heart
  • 74lung
  • 68intestine
  • 65vasculature
  • 64limb
  • 57uterus
  • 56blood vessel
  • 53bodily fluid
  • 51blood
  • 44liver
  • 42skin of body
  • 40large intestine
  • 34extraembryonic component
  • 28pancreas
  • 28stomach
  • 22artery
  • 22small intestine
  • 19adipose tissue
  • 19adrenal gland
  • 17mammary gland
  • 17placenta
  • 14bone element
  • 14prostate gland
  • 13spinal cord
  • 13ureter
  • 12esophagus
  • 12gonad
  • 11thymus
  • 10eye
  • 10penis
  • 9nerve
  • 8lymph node
  • 7spleen
  • 6lymphatic vessel
  • 6lymphoid tissue
  • 6ovary
  • 6testis
  • 6thyroid gland
  • 5mouth
  • 4vein
  • 3breast
  • 3bronchus
  • 3skeleton
  • 3vagina
  • 2tongue
  • 2urinary bladder
  • 1bone marrow
  • 1nose
  • 1pituitary gland
Project
  • 1404AMP
  • 111ENCODE
  • 2T1D
Genome assembly (visualization)
  • 6097hg19
  • 1517GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
BIOSAMPLE
TYPE

1517 results

search-icontable-tab-icon
Clear Filters
chromatin state
target gene predictions
eQTL
histone modifications
Fine-mapped variants
candidate regulatory elements
gene expression
caQTL
binding sites
tissue
heart21
brain182
stomach191
lung161
kidney16
primary cell
monocyte384
common myeloid progenitor, CD34-positive13
macrophage1731
pericyte cell192
B cell83
cell line
HeLa-S3351
H1-hESC137
K562616
HFFc619
A54918
in vitro differentiated cells
neural progenitor cell413
hematopoietic multipotent progenitor cell10
adipocyte2
endodermal cell2
mesenchymal stem cell2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego