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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
41
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
124
bed bed3+
33
bed bed9
2
tsv
Organism
161
Homo sapiens
Biosample type
131
tissue
30
cell line
Organ
521
epithelium
462
kidney
424
brain
345
musculature of body
332
connective tissue
293
lung
260
intestine
225
heart
224
limb
206
bodily fluid
203
embryo
blood
194
vasculature
193
pancreas
186
skin of body
161
large intestine
158
blood vessel
137
extraembryonic component
131
liver
107
stomach
82
adipose tissue
79
small intestine
79
uterus
77
mammary gland
73
bone element
73
prostate gland
69
placenta
62
adrenal gland
61
penis
60
ureter
59
artery
54
lymph node
50
eye
47
thymus
44
gonad
41
spinal cord
39
esophagus
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
vein
20
ovary
20
thyroid gland
18
mouth
13
pituitary gland
12
breast
12
bronchus
11
lymphatic vessel
10
bone marrow
10
skeleton
10
vagina
9
tongue
urinary bladder
4
trachea
3
nose
1
pericardium
Project
161
AMP
3
ENCODE
Genome assembly (visualization)
157
hg19
37
GRCh38
annotation_type!
accessible chromatin
organ_slims!
blood
urinary bladder
BIOSAMPLE
TYPE
161 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
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