Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • accessible chromatin
  • 224gene expression
  • 144target gene predictions
  • 119differential activity
  • 38candidate regulatory elements
  • 11eQTL
  • 7caQTL
  • 6binding sites
  • 2pQTL
  • 2sQTL
  • 1variant allelic effects
Date released
  • 286September, 2023
  • 111November, 2021
  • 40May, 2024
  • 32February, 2024
  • 31August, 2021
  • 28January, 2021
  • 9March, 2023
  • 7February, 2021
  • 7October, 2022
  • 2January, 2025
  • 1February, 2023
Available data
  • 324tsv
  • 203bed bed3+
  • 25txt
  • 9bigWig
  • 2csv
Organism
  • 553Homo sapiens
Collection Tags
  • 281KPMP
  • 127AMP
  • 116T2DKP
  • 71DGA
  • 36 T2DKP
  • 30T1D
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 9CMDGA
Biosample type
  • 526primary cell
  • 13tissue
  • 9cell line
  • 4in vitro differentiated cells
  • 1stem cell
Organ
  • 255epithelium
  • 160kidney
  • 57connective tissue
  • 49vasculature
  • 30blood vessel
  • 19pancreas
  • 18liver
  • 12musculature of body
  • 9lymphatic vessel
  • 8intestine
  • 6heart
  • 5artery
  • 5skin of body
  • 4adrenal gland
  • 4stomach
  • 3brain
  • 3large intestine
  • 3lung
  • 3mammary gland
  • 2esophagus
  • 2small intestine
  • 1bone element
  • 1bone marrow
  • 1bronchus
  • 1gonad
  • 1ovary
  • 1thyroid gland
  • 1uterus
Project
  • 281KPMP
  • 113AMP
  • 111ENCODE
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 217hg19
  • 166GRCh38
annotation_type!
  • accessible chromatin
award.rfa!
  • AMP
BIOSAMPLE
TYPE

554 results

search-icontable-tab-icon
Clear Filters
gene expression
target gene predictions
differential activity
candidate regulatory elements
eQTL
caQTL
binding sites
pQTL
sQTL
variant allelic effects
primary cell
endothelial cell47311
pericyte cell92
smooth muscle cell16211
endothelial cell of hepatic sinusoid46
fibroblast43
tissue
kidney71
cartilage tissue22
synovial joint1
cell line
induced pluripotent stem cell7
EndoC_BH12
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)1
ESC dervived hypothalamic progenitor (arcuate nucleus)1
Human Mesenchymal Cell derived Adipocytes1
Human Mesenchymal Cell derived Osteoblasts1
stem cell
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego