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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1713candidate regulatory elements
  • 1361target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 817binding sites
  • 694gene expression
  • 198eQTL
  • 181differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 363May, 2021
  • 329February, 2024
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 20October, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2March, 2026
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5181bed bed3+
  • 3597tsv
  • 869bed bed9
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 9795Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 960ENCODE
  • 570DGA
  • 371T1D
  • 284AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 138 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 63STARNET
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5148tissue
  • 2189cell line
  • 2054primary cell
  • 401in vitro differentiated cells
  • 4stem cell
Organ
  • 2882vasculature
  • 2847bodily fluid
  • 2836blood
  • 2827blood vessel
  • 2656vein
  • 748epithelium
  • 602kidney
  • 425brain
  • 398connective tissue
  • 366musculature of body
  • 296lung
  • 268intestine
  • 233heart
  • 224limb
  • 212pancreas
  • 203embryo
  • 191skin of body
  • 164large intestine
  • 144liver
  • 137extraembryonic component
  • 111stomach
  • 97adipose tissue
  • 81small intestine
  • 80mammary gland
  • 80uterus
  • 74bone element
  • 73artery
  • 73prostate gland
  • 69placenta
  • 66adrenal gland
  • 61penis
  • 60ureter
  • 54lymph node
  • 50eye
  • 47thymus
  • 45gonad
  • 41esophagus
  • 41spinal cord
  • 32spleen
  • 24testis
  • 22lymphoid tissue
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 20lymphatic vessel
  • 18mouth
  • 13bronchus
  • 13pituitary gland
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9355AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 15community
  • 5ITG
Genome assembly (visualization)
  • 6097hg19
  • 1521GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
biosample_term_name!!
  • pigmented layer of retina
BIOSAMPLE
TYPE

9798 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
histone modifications
binding sites
chromatin state
gene expression
target gene predictions
variant allelic effects
tissue
whole blood26351
heart372012114
stomach402111911
brain2916318112
kidney2914216171
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
primary cell
monocyte2861154
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753013
B cell171082
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell551547
adipocyte461611
cardiomyocytes11
mesenchymal stem cell33121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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