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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3016target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 1659July, 2026
  • 363May, 2021
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6840bed bed3+
  • 3551tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 11710Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 570DGA
  • 371T1D
  • 320pyxis
  • 284AMP
  • 281KPMP
  • 206BLUEPRINT
  • 201HDMA
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 138 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5754tissue
  • 3112primary cell
  • 2396cell line
  • 445in vitro differentiated cells
  • 4stem cell
Organ
  • 3353blood
  • 2866vasculature
  • 2841bodily fluid
  • 2835blood vessel
  • 2657vein
  • 739epithelium
  • 710brain
  • 706kidney
  • 446heart
  • 429connective tissue
  • 407lung
  • 355musculature of body
  • 337intestine
  • 264skin of body
  • 254pancreas
  • 224limb
  • 216large intestine
  • 203embryo
  • 202liver
  • 165extraembryonic component
  • 135adipose tissue
  • 132stomach
  • 97mammary gland
  • 94small intestine
  • 93placenta
  • 91adrenal gland
  • 90uterus
  • 89bone element
  • 87muscle organ
  • 83eye
  • 82prostate gland
  • 77artery
  • 74thymus
  • 69ureter
  • 61penis
  • 60__MARKER__
  • 59gonad
  • 54lymph node
  • 49spleen
  • 47spinal cord
  • 44esophagus
  • 37thyroid gland
  • 30ovary
  • 29testis
  • 22lymphoid tissue
  • 22nerve
  • 20mouth
  • 17lymphatic vessel
  • 14breast
  • 14skeleton
  • 13bronchus
  • 13pituitary gland
  • 12urinary bladder
  • 12vagina
  • 11bone marrow
  • 11tongue
  • 4trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11268AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6097hg19
  • 3176GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
biosample_term_name!
  • slow muscle cell
BIOSAMPLE
TYPE

11713 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38371211412
stomach424011911
head of caudate nucleus86
brain30293181121
primary cell
monocyte28611544121
CD8-positive, alpha-beta T cell2773013
T-cell644
common myeloid progenitor, CD34-positive262713
endothelial cell17312925223
cell line
A54933211182
HeLa-S359531
H1-hESC3911128
K562307172
MCF-7139253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911011
neural progenitor cell651547
adipocyte741611
cardiomyocytes11
mesenchymal stem cell43121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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