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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • 753chromatin state
  • accessible chromatin
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1963September, 2022
  • 1277February, 2021
  • 307May, 2021
  • 286September, 2023
  • 161February, 2024
  • 121March, 2020
  • 111November, 2021
  • 99May, 2020
  • 92January, 2022
  • 89August, 2021
  • 64February, 2020
  • 61March, 2023
  • 40May, 2024
  • 38March, 2025
  • 31October, 2022
  • 30August, 2017
  • 29March, 2024
  • 28January, 2021
  • 28May, 2022
  • 24January, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 6February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3554tsv
  • 3209bed bed3+
  • 690bed bed9
  • 108txt
  • 40bigBed bed9
  • 27bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 7563Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1962EpiMap
  • 744ENCODE
  • 511DGA
  • 405ChIP-Atlas
  • 353T1D
  • 281KPMP
  • 271AMP
  • 199BLUEPRINT
  • 151T2DKP
  • 150GTEx
  • 127 T2DKP
  • 91T2D
  • 91eQTLCatalogue
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 5126tissue
  • cell line
  • 2033primary cell
  • 401in vitro differentiated cells
  • 4stem cell
Organ
  • 2868vasculature
  • 2817blood vessel
  • 2654vein
  • 2653bodily fluid
  • 2652blood
  • 715epithelium
  • 566kidney
  • 367connective tissue
  • 357brain
  • 338musculature of body
  • 238intestine
  • 225heart
  • 218limb
  • 204lung
  • 186pancreas
  • 134extraembryonic component
  • 134large intestine
  • 123skin of body
  • 114liver
  • 111stomach
  • 90adipose tissue
  • 82embryo
  • 81small intestine
  • 66adrenal gland
  • 66placenta
  • 65artery
  • 60ureter
  • 47thymus
  • 46penis
  • 45mammary gland
  • 42eye
  • 41esophagus
  • 39gonad
  • 39spinal cord
  • 32spleen
  • 26bone element
  • 24prostate gland
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 18lymphatic vessel
  • 18testis
  • 17lymphoid tissue
  • 15uterus
  • 14mouth
  • 13bronchus
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 7134AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 3950hg19
  • 1156GRCh38
  • 3hg18
annotation_type!
  • accessible chromatin
biosample_type!
  • cell line
BIOSAMPLE
TYPE

7566 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
gene expression
histone modifications
eQTL
binding sites
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720213112
stomach402119111
brain29161813211
kidney29141672111
primary cell
monocyte2158641121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell751330
B cell171082
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191010111
neural progenitor cell554715
adipocyte466111
cardiomyocytes11
mesenchymal stem cell33211
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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