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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 2412target gene predictions
  • 1382candidate regulatory elements
  • accessible chromatin
  • 753chromatin state
  • 664gene expression
  • 474differential activity
  • 393histone modifications
  • 174binding sites
  • 170eQTL
  • 137variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 1963September, 2022
  • 1454July, 2026
  • 1277February, 2021
  • 320May, 2026
  • 307May, 2021
  • 286September, 2023
  • 156February, 2024
  • 121March, 2020
  • 111November, 2021
  • 99May, 2020
  • 92January, 2022
  • 89August, 2021
  • 64February, 2020
  • 61March, 2023
  • 40May, 2024
  • 31October, 2022
  • 30August, 2017
  • 29March, 2024
  • 28January, 2021
  • 28May, 2022
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 6February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 4663bed bed3+
  • 3529tsv
  • 690bed bed9
  • 112txt
  • 40bigBed bed9
  • 27bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 9316Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1962EpiMap
  • 1251ENCODE-rE2G
  • 744ENCODE
  • 511DGA
  • 405ChIP-Atlas
  • 353T1D
  • 320pyxis
  • 281KPMP
  • 271AMP
  • 203HDMA
  • 199BLUEPRINT
  • 151T2DKP
  • 150GTEx
  • 127 T2DKP
  • 91T2D
  • 91eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 12CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 5754tissue
  • 3114primary cell
  • cell line
  • 445in vitro differentiated cells
  • 4stem cell
Organ
  • 3117blood
  • 2857vasculature
  • 2830blood vessel
  • 2655vein
  • 2647bodily fluid
  • 708epithelium
  • 663kidney
  • 629brain
  • 440heart
  • 404connective tissue
  • 340musculature of body
  • 283intestine
  • 282lung
  • 225pancreas
  • 218limb
  • 180skin of body
  • 173liver
  • 162large intestine
  • 161extraembryonic component
  • 133adipose tissue
  • 132stomach
  • 94small intestine
  • 91adrenal gland
  • 89placenta
  • 88muscle organ
  • 82embryo
  • 74artery
  • 74thymus
  • 73eye
  • 69ureter
  • 60__MARKER__
  • 52gonad
  • 49mammary gland
  • 49spleen
  • 46penis
  • 45spinal cord
  • 44esophagus
  • 37thyroid gland
  • 33bone element
  • 30ovary
  • 26prostate gland
  • 22nerve
  • 22testis
  • 17lymphoid tissue
  • 17uterus
  • 16mouth
  • 16skeleton
  • 15lymphatic vessel
  • 14breast
  • 13bronchus
  • 12vagina
  • 11bone marrow
  • 11tongue
  • 10urinary bladder
  • 4trachea
  • 3nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8883AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 8community
  • 5ITG
Genome assembly (visualization)
  • 3950hg19
  • 2610GRCh38
  • 3hg18
annotation_type!
  • accessible chromatin
biosample_type!
  • cell line
BIOSAMPLE
TYPE

9319 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
candidate regulatory elements
chromatin state
gene expression
differential activity
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38372141112
stomach424019111
head of caudate nucleus86
brain30291813121
primary cell
monocyte21548614121
CD8-positive, alpha-beta T cell2771330
T-cell644
common myeloid progenitor, CD34-positive262713
endothelial cell17392512223
in vitro differentiated cells
hematopoietic multipotent progenitor cell221910111
neural progenitor cell654715
adipocyte746111
cardiomyocytes11
mesenchymal stem cell43211
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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