Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 888histone modifications
  • 839target gene predictions
  • 781binding sites
  • 772candidate regulatory elements
  • accessible chromatin
  • 573gene expression
  • 433chromatin state
  • 162differential activity
  • 92variant allelic effects
  • 65eQTL
  • 23caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1946February, 2021
  • 1129September, 2022
  • 333May, 2021
  • 316February, 2024
  • 286September, 2023
  • 111November, 2021
  • 101October, 2022
  • 64March, 2023
  • 59August, 2021
  • 48May, 2020
  • 46January, 2022
  • 40May, 2024
  • 34May, 2022
  • 28January, 2021
  • 24March, 2020
  • 21July, 2025
  • 16August, 2017
  • 16February, 2020
  • 9August, 2018
  • 6February, 2023
  • 2January, 2020
  • 2January, 2025
  • 2March, 2024
  • 2October, 2019
  • 1July, 2020
  • 1November, 2019
  • 1November, 2020
Available data
  • 3451bed bed3+
  • 709tsv
  • 383bed bed9
  • 108txt
  • 34bed bed9+
  • 26csv
  • 16bigWig
  • 9bigBed bed9
  • 7bigBed narrowPeak
Organism
  • 4643Homo sapiens
Collection Tags
  • 1435ChIP-Atlas
  • 1122EpiMap
  • 465ENCODE
  • 436DGA
  • 306T1D
  • 281KPMP
  • 236AMP
  • 205BLUEPRINT
  • 1744DN
  • 120T2DKP
  • 73 T2DKP
  • 55HPAP
  • 45T2D
  • 45eQTLCatalogue
  • 26FNIH_projects-heart
  • 17CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 2GTEx
Biosample type
  • tissue
  • 2189cell line
  • 2048primary cell
  • 401in vitro differentiated cells
  • 4stem cell
Organ
  • 719epithelium
  • 322kidney
  • 296connective tissue
  • 202bodily fluid
  • 192blood
  • 170embryo
  • 166skin of body
  • 157vasculature
  • 118pancreas
  • 117lung
  • 102blood vessel
  • 98brain
  • 80liver
  • 78mammary gland
  • 68uterus
  • 60bone element
  • 59penis
  • 59prostate gland
  • 58musculature of body
  • 54lymph node
  • 42extraembryonic component
  • 42intestine
  • 34heart
  • 33large intestine
  • 28artery
  • 24eye
  • 20lymphatic vessel
  • 20vein
  • 13bronchus
  • 11bone marrow
  • 10pituitary gland
  • 10placenta
  • 8esophagus
  • 8gonad
  • 8mouth
  • 7limb
  • 7testis
  • 6spinal cord
  • 6stomach
  • 5adrenal gland
  • 5lymphoid tissue
  • 4adipose tissue
  • 4trachea
  • 3nose
  • 2small intestine
  • 2thyroid gland
  • 1ovary
  • 1pericardium
Project
  • 4208AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
Genome assembly (visualization)
  • 3836hg19
  • 872GRCh38
  • 1hg18
annotation_type!
  • accessible chromatin
biosample_type!
  • tissue
BIOSAMPLE
TYPE

4644 results

search-icontable-tab-icon
Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
gene expression
chromatin state
differential activity
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S355153
A54911922118
H1-hESC1392181
K562123277
MCF-726395
primary cell
monocyte8621154211
common myeloid progenitor, CD34-positive142713
CD8-positive, alpha-beta T cell305731
B cell101728
CD4-positive, alpha-beta memory T cell9149
in vitro differentiated cells
hematopoietic multipotent progenitor cell110119110
neural progenitor cell155574
adipocyte161416
cardiomyocytes11
mesenchymal stem cell13132
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego