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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1836target gene predictions
  • accessible chromatin
  • 888histone modifications
  • 781binding sites
  • 772candidate regulatory elements
  • 573gene expression
  • 482differential activity
  • 433chromatin state
  • 92variant allelic effects
  • 65eQTL
  • 23caQTL
  • 5hQTL
  • 5sQTL
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 1946February, 2021
  • 1129September, 2022
  • 997July, 2026
  • 333May, 2021
  • 320May, 2026
  • 316February, 2024
  • 286September, 2023
  • 111November, 2021
  • 101October, 2022
  • 64March, 2023
  • 59August, 2021
  • 48May, 2020
  • 46January, 2022
  • 40May, 2024
  • 34May, 2022
  • 28January, 2021
  • 24March, 2020
  • 21July, 2025
  • 16August, 2017
  • 16February, 2020
  • 9August, 2018
  • 6February, 2023
  • 2January, 2020
  • 2January, 2025
  • 2March, 2024
  • 2October, 2019
  • 1July, 2020
  • 1November, 2019
  • 1November, 2020
Available data
  • 4448bed bed3+
  • 709tsv
  • 383bed bed9
  • 108txt
  • 34bed bed9+
  • 26csv
  • 16bigWig
  • 9bigBed bed9
  • 7bigBed narrowPeak
Organism
  • 5960Homo sapiens
Collection Tags
  • 1435ChIP-Atlas
  • 1122EpiMap
  • 794ENCODE-rE2G
  • 465ENCODE
  • 436DGA
  • 320pyxis
  • 306T1D
  • 281KPMP
  • 236AMP
  • 205BLUEPRINT
  • 203HDMA
  • 1744DN
  • 120T2DKP
  • 73 T2DKP
  • 55HPAP
  • 45T2D
  • 45eQTLCatalogue
  • 26FNIH_projects-heart
  • 17CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 2GTEx
Biosample type
  • tissue
  • 3114primary cell
  • 2396cell line
  • 445in vitro differentiated cells
  • 4stem cell
Organ
  • 715blood
  • 710epithelium
  • 356kidney
  • 341connective tissue
  • 234skin of body
  • 202bodily fluid
  • 195heart
  • 176lung
  • 170embryo
  • 164brain
  • 154vasculature
  • 148pancreas
  • 141liver
  • 112blood vessel
  • 95mammary gland
  • 76bone element
  • 76uterus
  • 67prostate gland
  • 66intestine
  • 60__MARKER__
  • 59penis
  • 58musculature of body
  • 57large intestine
  • 56adipose tissue
  • 54lymph node
  • 52eye
  • 46extraembryonic component
  • 36artery
  • 27muscle organ
  • 20vein
  • 18thymus
  • 17lymphatic vessel
  • 15adrenal gland
  • 14thyroid gland
  • 13bronchus
  • 12placenta
  • 12spleen
  • 11bone marrow
  • 10pituitary gland
  • 9esophagus
  • 9gonad
  • 8mouth
  • 8testis
  • 7limb
  • 6spinal cord
  • 6stomach
  • 5lymphoid tissue
  • 5skeleton
  • 4trachea
  • 3nose
  • 2small intestine
  • 2urinary bladder
  • 1ovary
  • 1pericardium
Project
  • 5525AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
Genome assembly (visualization)
  • 3836hg19
  • 1869GRCh38
  • 1hg18
annotation_type!
  • accessible chromatin
biosample_type!
  • tissue
BIOSAMPLE
TYPE

5961 results

search-icontable-tab-icon
Clear Filters
target gene predictions
histone modifications
binding sites
candidate regulatory elements
gene expression
differential activity
chromatin state
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte28611544211
CD8-positive, alpha-beta T cell2730731
T-cell644
common myeloid progenitor, CD34-positive262713
endothelial cell17123925223
cell line
A54933122118
HeLa-S359153
H1-hESC3912181
K562301277
MCF-7132395
in vitro differentiated cells
hematopoietic multipotent progenitor cell221119110
neural progenitor cell615574
adipocyte711416
cardiomyocytes11
mesenchymal stem cell41132
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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