Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 937candidate regulatory elements
  • 518target gene predictions
  • 511chromatin state
  • accessible chromatin
  • 129eQTL
  • 116gene expression
  • 89histone modifications
  • 82Fine-mapped variants
  • 49variant allelic effects
  • 36binding sites
  • 10differential activity
  • 4variant to gene
  • 2caQTL
  • 2sQTL
  • 1other
Date released
  • 2639February, 2025
  • 1376September, 2022
  • 633February, 2021
  • 104March, 2020
  • 56January, 2022
  • 53May, 2020
  • 48February, 2020
  • 39August, 2021
  • 32March, 2025
  • 30May, 2021
  • 28March, 2024
  • 22January, 2020
  • 19August, 2017
  • 13February, 2024
  • 9May, 2019
  • 8April, 2019
  • 6March, 2023
  • 3October, 2019
  • 2January, 2018
  • 1August, 2020
  • 1August, 2022
  • 1February, 2023
  • 1May, 2022
  • 1November, 2019
Available data
  • 2882tsv
  • 1730bed bed3+
  • 486bed bed9
  • 31bigBed bed9
  • 2bigWig
  • 1bam
Organism
  • 5124Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1377EpiMap
  • 495ENCODE
  • 149GTEx
  • 134DGA
  • 124ChIP-Atlas
  • 65 T2DKP
  • 65T1D
  • 56T2D
  • 56eQTLCatalogue
  • 48AMP
  • 37STARNET
  • 31T2DKP
  • 7CMDGA
  • 1BLUEPRINT
Biosample type
  • 5126tissue
  • 2189cell line
  • 2033primary cell
  • 401in vitro differentiated cells
  • 4stem cell
Organ
  • 2720blood vessel
  • 2720vasculature
  • 2645bodily fluid
  • 2644blood
  • 2636vein
  • 327brain
  • 303musculature of body
  • 280kidney
  • 226intestine
  • 217limb
  • 197heart
  • 179lung
  • 131large intestine
  • 105stomach
  • 97connective tissue
  • 95extraembryonic component
  • 94pancreas
  • 88adipose tissue
  • 79small intestine
  • 61adrenal gland
  • 60ureter
  • 59liver
  • 59placenta
  • 47thymus
  • 40artery
  • 37gonad
  • 35spinal cord
  • 33embryo
  • 33esophagus
  • 32spleen
  • 29epithelium
  • 26eye
  • 25skin of body
  • 22nerve
  • 20ovary
  • 19thyroid gland
  • 17lymphoid tissue
  • 17testis
  • 14bone element
  • 14prostate gland
  • 12breast
  • 12uterus
  • 10mouth
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 3pituitary gland
  • 2mammary gland
  • 2penis
Project
  • 5121AMP
  • 5ITG
Genome assembly (visualization)
  • 2261hg19
  • 645GRCh38
  • 3hg18
annotation_type!
  • accessible chromatin
BIOSAMPLE
TYPE

5126 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
caQTL
sQTL
other
tissue
whole blood26351
heart3720213121
stomach402119111
brain29161821311
kidney29141617211
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego