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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • accessible chromatin
  • 977histone modifications
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 75chromatin state
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • 1672September, 2022
  • 1661July, 2026
  • 358May, 2021
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 98August, 2021
  • 98May, 2020
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 21July, 2025
  • 18January, 2020
  • 9August, 2018
  • 7February, 2023
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2019
  • 1November, 2020
Available data
  • 6842bed bed3+
  • 3551tsv
  • bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 10843Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 565DGA
  • 371T1D
  • 320pyxis
  • 283AMP
  • 281KPMP
  • 206BLUEPRINT
  • 203HDMA
  • 1744DN
  • 151GTEx
  • 150T2DKP
  • 138 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5268tissue
  • 2950primary cell
  • 2217cell line
  • 405in vitro differentiated cells
  • 4stem cell
Organ
  • 3330blood
  • 2834vasculature
  • 2816bodily fluid
  • 2808blood vessel
  • 2653vein
  • 689epithelium
  • 644brain
  • 629kidney
  • 400heart
  • 388connective tissue
  • 337lung
  • 284musculature of body
  • 282intestine
  • 241pancreas
  • 230skin of body
  • 188liver
  • 183large intestine
  • 176embryo
  • 174limb
  • 132extraembryonic component
  • 127adipose tissue
  • 109stomach
  • 89muscle organ
  • 86uterus
  • 83mammary gland
  • 77adrenal gland
  • 77bone element
  • 77placenta
  • 75small intestine
  • 74eye
  • 69artery
  • 69prostate gland
  • 63thymus
  • 60__MARKER__
  • 56ureter
  • 51gonad
  • 51penis
  • 46lymph node
  • 43spleen
  • 39spinal cord
  • 37esophagus
  • 33thyroid gland
  • 26ovary
  • 25testis
  • 18nerve
  • 17lymphoid tissue
  • 16mouth
  • 15lymphatic vessel
  • 13pituitary gland
  • 13skeleton
  • 12breast
  • 11bronchus
  • 10bone marrow
  • 10urinary bladder
  • 10vagina
  • 9tongue
  • 4trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 10401AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5228hg19
  • 2314GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

10846 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
binding sites
gene expression
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
head of caudate nucleus86
stomach4240111
heart383711412
kidney282921711
primary cell
monocyte28611544121
CD8-positive, alpha-beta T cell2773031
T-cell644
endothelial cell17312925223
CD4-positive, alpha-beta T cell5283
cell line
HeLa-S35951
A549332112
H1-hESC391128
K562307121
MCF-713923
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111
neural progenitor cell65157
adipocyte741114
cardiomyocytes11
progenitor cell of endocrine pancreas19
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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