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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 75chromatin state
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2579February, 2021
  • 1672September, 2022
  • 358May, 2021
  • 329February, 2024
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 98August, 2021
  • 98May, 2020
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 18January, 2020
  • 9August, 2018
  • 7February, 2023
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2019
  • 1November, 2020
Available data
  • 5181bed bed3+
  • 3576tsv
  • bed bed9
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 8883Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 1559ChIP-Atlas
  • 960ENCODE
  • 565DGA
  • 371T1D
  • 283AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 150T2DKP
  • 138 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4640tissue
  • 2010cell line
  • 1869primary cell
  • 361in vitro differentiated cells
  • 4stem cell
Organ
  • 2845vasculature
  • 2822bodily fluid
  • 2813blood
  • 2795blood vessel
  • 2652vein
  • 696epithelium
  • 525kidney
  • 359brain
  • 351connective tissue
  • 282musculature of body
  • 226lung
  • 213intestine
  • 199pancreas
  • 185heart
  • 176embryo
  • 174limb
  • 157skin of body
  • 131large intestine
  • 125liver
  • 104extraembryonic component
  • 88stomach
  • 84adipose tissue
  • 76uterus
  • 66mammary gland
  • 62small intestine
  • 60artery
  • 60bone element
  • 60prostate gland
  • 53placenta
  • 52adrenal gland
  • 51penis
  • 47ureter
  • 46lymph node
  • 41eye
  • 37gonad
  • 36thymus
  • 34esophagus
  • 33spinal cord
  • 26spleen
  • 20testis
  • 18lymphatic vessel
  • 18nerve
  • 17lymphoid tissue
  • 17ovary
  • 17thyroid gland
  • 14mouth
  • 13pituitary gland
  • 11bronchus
  • 10bone marrow
  • 10breast
  • 8vagina
  • 7skeleton
  • 7tongue
  • 7urinary bladder
  • 4trachea
  • 2nose
  • 1pericardium
Project
  • 8445AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5228hg19
  • 653GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
files.file_type!
  • bed bed9
BIOSAMPLE
TYPE

8886 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201132
stomach4021111
kidney291421711
brain291631121
cell line
HeLa-S35551
H1-hESC139128
A549211912
K562723121
MCF-79623
primary cell
monocyte2861154121
CD8-positive, alpha-beta T cell753031
common myeloid progenitor, CD34-positive2714
B cell17102
CD14-positive monocyte819
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910111
neural progenitor cell55157
adipocyte461114
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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