Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
25
target gene predictions
18
chromatin state
accessible chromatin
3
binding sites
3
eQTL
1
histone modifications
1
variant allelic effects
Date released
54
September, 2022
22
February, 2021
4
November, 2021
3
January, 2022
2
May, 2021
1
February, 2024
1
March, 2020
1
October, 2022
Available data
67
bed bed3+
18
bed bed9
tsv
Organism
88
Homo sapiens
Biosample type
76
tissue
6
cell line
6
primary cell
Organ
413
epithelium
357
brain
351
kidney
334
musculature of body
307
connective tissue
295
lung
265
intestine
207
limb
205
bodily fluid
200
heart
194
blood
193
embryo
189
skin of body
166
vasculature
162
large intestine
137
extraembryonic component
136
pancreas
131
blood vessel
109
stomach
104
liver
81
small intestine
80
mammary gland
78
uterus
72
prostate gland
70
bone element
69
placenta
65
adrenal gland
61
penis
60
adipose tissue
60
ureter
54
lymph node
48
artery
48
eye
47
thymus
43
gonad
39
esophagus
36
spinal cord
31
spleen
23
testis
21
lymphoid tissue
20
ovary
20
thyroid gland
20
vein
17
mouth
nerve
13
bronchus
12
lymphatic vessel
12
pituitary gland
11
bone marrow
11
breast
10
skeleton
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
84
AMP
4
ENCODE
Genome assembly (visualization)
85
hg19
25
GRCh38
annotation_type!
accessible chromatin
files.file_type!
tsv
organ_slims!
nerve
BIOSAMPLE
TYPE
88 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
histone modifications
variant allelic effects
tissue
adrenal gland
28
17
14
1
testis
7
3
3
1
1
1
cell line
NT2-D1 cell
1
1
1
2
NT2/D1
1
primary cell
cortical cell of adrenal gland
2
1
Leydig cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
Download